Gene Synpcc7942_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1964 
SymbolubiA 
ID3774149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2034764 
End bp2035696 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID637800407 
Product4-hydroxybenzoate polyprenyltransferase 
Protein accessionYP_400981 
Protein GI81300773 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.855973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGG GGCCTCACTC GCAGTGGGAT AATAAAGCCG CATCTGACAA TGCCATGAGT 
ACCTCTCTCC CCCGTGAATC GACTTGGCTG GCAGTCATTC GCCTGTTGCG CTGGGATAAG
CCAGCCGGGC GATTGATTCT GTTGTTGCCA GCGCTATGGG CGGTGGTCTT GGCTTCTGGC
GGACGGCCTG ATTTTGGTCT GATCTGGTTG ATTATCTGCG GCGGTTTGGC GGCTAGTGCG
GCCGGTTGCG TGATCAATGA TCTTTGGGAT CGCAACCTCG ATCCGCGGGT TGAACGCACC
AAGCAAAGGC CCTTGGCCTC CCGTCGCCTG TCCACAAGAG TCGGCGCGAT CGCGGCGATC
GTGTCGCTGT TAGCGGCTTG GGGGTTGGCT CAATTTCTGA CGCCGCTGGG CTACTGGCTG
TGCGTGGCAG CTGTGCCCGT GATCGTGCTC TATCCGGGGG CAAAGCGTGT CTTTCCGGTT
CCGCAACTGG TGCTGGCGAT CGCCTGGGGA TTTAGTGTGC TGATCAGCTG GGCGGCGGTG
CAGGGGGAGC TGACTTGGGC AGCGATCGCC CTCTGGGCAG CAACCCTGTT TTGGACCCTT
GGCTTTGATA CAGTCTATGC CTTGGCCGAT CGCGAGGACG ATATCCAAGT GGGAATCCAG
TCCAGCGCTC GCTTCTTTGG CGACTTAGCC CCACTGGCGA TCGCAGCTTG CTACCTGTTG
ACCAGTCTCT TTCTGGCCTG GACGGGGGCT CTGCTCAACC TCCATCCCCT CTTTTGGCTG
GCTTGGGGCG GAGCGACGGG CTTGTGGGTC TATCAAAGCT GGCGCTTGCG CGAGCCCCTG
CCTCGGGCAA TCTATAGCCA GCTGTTTGCT GAGAATGTCT CGATTGGTCT ACTGGTGCTG
ACGGGCTTTT GGCTGGGAGC TTGGTTGCTG TGA
 
Protein sequence
MQRGPHSQWD NKAASDNAMS TSLPRESTWL AVIRLLRWDK PAGRLILLLP ALWAVVLASG 
GRPDFGLIWL IICGGLAASA AGCVINDLWD RNLDPRVERT KQRPLASRRL STRVGAIAAI
VSLLAAWGLA QFLTPLGYWL CVAAVPVIVL YPGAKRVFPV PQLVLAIAWG FSVLISWAAV
QGELTWAAIA LWAATLFWTL GFDTVYALAD REDDIQVGIQ SSARFFGDLA PLAIAACYLL
TSLFLAWTGA LLNLHPLFWL AWGGATGLWV YQSWRLREPL PRAIYSQLFA ENVSIGLLVL
TGFWLGAWLL