Gene Synpcc7942_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1958 
Symbol 
ID3774143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2029762 
End bp2030133 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID637800401 
Producthypothetical protein 
Protein accessionYP_400975 
Protein GI81300767 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTC TCTGGAATCT TCCTCGGCTG GCGCGCGATC GCAGCTTCAA TGCGACGTCC 
CTCGCTGAGG TGACGGGGCT GCCGCTGACC CTAGTCGAAG GCTGGCTTCA ACAGCGGTTG
ATGCCACCCC TCACCGCCCA CGAACTCGAT CGCCTCTGTC AGGCGTTGAA CTGCCAACCG
GGGGACTTGC TGGTGGCTGA AGCACCCGAA ACAGTTTTGG CCTGCGAGGG TGAACAAACC
TGTCTGGACT CGCTGCTAGA TGCCAAGCTC CACATCTTCC ATGAGGAGAT GAATGGACAT
TTGACTCGCA TGCAGATTCA AGTCAGTGAT GAGGCGATCG CCGATGGTGA TCCGATCAGC
TCCGGTACCT AA
 
Protein sequence
MAILWNLPRL ARDRSFNATS LAEVTGLPLT LVEGWLQQRL MPPLTAHELD RLCQALNCQP 
GDLLVAEAPE TVLACEGEQT CLDSLLDAKL HIFHEEMNGH LTRMQIQVSD EAIADGDPIS
SGT