Gene Synpcc7942_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1953 
Symbol 
ID3774138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2025793 
End bp2026179 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content52% 
IMG OID637800396 
Product6-pyruvoyl tetrahydrobiopterin synthase 
Protein accessionYP_400970 
Protein GI81300762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTT GGACTCTGAG TACTGAATTT CACTTCAGTA GCGCCCACTG CATTCGGGAC 
TATGACGGTC CTTGTGGGCG AATGCATGGT CACACCTATC ACGTGCGGAT TGAAGCGATC
GCCTCTGAAC TCAGCCCCTC TGAATACTGC CCCCATCCAG TGATGGTGGC GGATTTTCGG
ACATTACGCT GGGCTAAAAA AGATGTCACC AAGGGAGGAC TCGATCACTG TGTCCTCAAT
GAGGTGATGC CGCCTGAGTA TGAGACGACG GCGGAAATGA TTGCGAAGTA CATCCACGAC
AAGACAAAAA ATATGCTGCC GCCGGGTACC CAGCTCAAGG TTGCAGTCTC AGAAACACCG
AATTCTTGGG CGACCTACGA GGATTAA
 
Protein sequence
MPRWTLSTEF HFSSAHCIRD YDGPCGRMHG HTYHVRIEAI ASELSPSEYC PHPVMVADFR 
TLRWAKKDVT KGGLDHCVLN EVMPPEYETT AEMIAKYIHD KTKNMLPPGT QLKVAVSETP
NSWATYED