Gene Synpcc7942_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1946 
Symbol 
ID3774131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2021493 
End bp2021972 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID637800389 
Producthypothetical protein 
Protein accessionYP_400963 
Protein GI81300755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.647235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAT TTCAGGCTCG ATTGCGCTGG CCTCTGTTGG CGCTACTGCT GGTCGTGTCT 
GGGCCGCCGG CTAACGCTGA CACAGTCACG GGTTCAGGTA ACCTGCGACA GCAGCGACCC
GTGCAGCGAC TCCAAGGCAA TTGCCCCACT CAAATTCAAC TCACGACGAG TTGGCGCTGG
TATGAAGGAG GCGGGGAGCA TCTGGTAATC CCAGAGACGA CGGCTACGGC GGGGCGATCG
CGCTATGTGA CTGGAACTGC CAAGACCGCT GAATATCAAG CGCCGTTGCT GCCTGATTTT
GCTTCCTGTG TCGCAGAAGT GCGGCCCAGT GCCGACTTCC CCTATCGCTT GGTCTGGAAG
GCGGGTCGCC TCACTTTTCG GGTCGAACTA CCTGCCGATA CGCCAGCCAA TCCCTCTCGG
ATCAGCCAAC GAGCCATTCT GGACGGCCGT CCCTACGTGC GCTGGCAAAT TGCGGACTAG
 
Protein sequence
MTAFQARLRW PLLALLLVVS GPPANADTVT GSGNLRQQRP VQRLQGNCPT QIQLTTSWRW 
YEGGGEHLVI PETTATAGRS RYVTGTAKTA EYQAPLLPDF ASCVAEVRPS ADFPYRLVWK
AGRLTFRVEL PADTPANPSR ISQRAILDGR PYVRWQIAD