Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1946 |
Symbol | |
ID | 3774131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2021493 |
End bp | 2021972 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800389 |
Product | hypothetical protein |
Protein accession | YP_400963 |
Protein GI | 81300755 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.647235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCAT TTCAGGCTCG ATTGCGCTGG CCTCTGTTGG CGCTACTGCT GGTCGTGTCT GGGCCGCCGG CTAACGCTGA CACAGTCACG GGTTCAGGTA ACCTGCGACA GCAGCGACCC GTGCAGCGAC TCCAAGGCAA TTGCCCCACT CAAATTCAAC TCACGACGAG TTGGCGCTGG TATGAAGGAG GCGGGGAGCA TCTGGTAATC CCAGAGACGA CGGCTACGGC GGGGCGATCG CGCTATGTGA CTGGAACTGC CAAGACCGCT GAATATCAAG CGCCGTTGCT GCCTGATTTT GCTTCCTGTG TCGCAGAAGT GCGGCCCAGT GCCGACTTCC CCTATCGCTT GGTCTGGAAG GCGGGTCGCC TCACTTTTCG GGTCGAACTA CCTGCCGATA CGCCAGCCAA TCCCTCTCGG ATCAGCCAAC GAGCCATTCT GGACGGCCGT CCCTACGTGC GCTGGCAAAT TGCGGACTAG
|
Protein sequence | MTAFQARLRW PLLALLLVVS GPPANADTVT GSGNLRQQRP VQRLQGNCPT QIQLTTSWRW YEGGGEHLVI PETTATAGRS RYVTGTAKTA EYQAPLLPDF ASCVAEVRPS ADFPYRLVWK AGRLTFRVEL PADTPANPSR ISQRAILDGR PYVRWQIAD
|
| |