Gene Synpcc7942_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1937 
Symbol 
ID3775300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2010387 
End bp2011127 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content56% 
IMG OID637800379 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_400954 
Protein GI81300746 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAC TGTTTGGCAA GAAAACCGGT CTCCCAACTC CAGAGGAAGC CTTACCGGGT 
CGTGCACAAG CGATGCTGGT GCCGGCAAAA CACTTTGTGC TTGGGACTCC GCTGGATGGC
CCTTTCCCAG TCGGGATTCA ACTTGCTCTC TTTGGTAACG GTTGCTTCTG GGGAACCGAG
AAACAGTTTT GGCAGTTGCC CGGCGTCTAT TCCACAGCGG TGGGCTACGC TGGCGGCCTA
ACGCCCAACC CCAACTATCG TGAGGTCTGC AGCGGCATGA CCGGTCATAA CGAAGTTGTG
CGGGTGGCCT ACGATCCCGA TCGCATCAGC TATGCCGACC TACTCAAAGC CTTTTGGGAA
AGCCATGATC CCACCCAAGG GATGGGTCAA GGACCCGATC GCGGCACACA GTATCGCTCT
GGCATTTACT GCTACACGCC CGAGCAAAAG CAGATTGCGC TGGCTTCTCA AGCAGCCTAT
CAAGCAGTCT TAAAAGCCAA GGGCTACGGT GCTATCACCA CTGAGATCAT TGACGCGCCG
ACCTTCTACT TTGCAGAGGA GTACCACCAG CAGTACCTCG ATAAACCTGG CAGTCGTCCA
TACTGCGGTG CCCAACCCAC CGGCGCTGAC CTGCCCCATC CCAATCAGTG GAATCTGCCG
ACTGAACTCC AGTCACACCT CACTGCTCAT CCCGAAGTTT GGTCGAAAAA CTTTGCGGAA
TGCCCCGTGG TGCCCCACTA A
 
Protein sequence
MFGLFGKKTG LPTPEEALPG RAQAMLVPAK HFVLGTPLDG PFPVGIQLAL FGNGCFWGTE 
KQFWQLPGVY STAVGYAGGL TPNPNYREVC SGMTGHNEVV RVAYDPDRIS YADLLKAFWE
SHDPTQGMGQ GPDRGTQYRS GIYCYTPEQK QIALASQAAY QAVLKAKGYG AITTEIIDAP
TFYFAEEYHQ QYLDKPGSRP YCGAQPTGAD LPHPNQWNLP TELQSHLTAH PEVWSKNFAE
CPVVPH