| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1927 |
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| Symbol | dapF |
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| ID | 3775290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2001982 |
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| End bp | 2002824 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800369 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_400944 |
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| Protein GI | 81300736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGC AGTTCGCGAA ATATCACGGT CTTGGCAATG ATTTCATCCT GGTGGACAAC
CGCGAGTCTG GGGAACCAAG GCTAACCCCG GAGCAAGCAG TGCAGGTCTG CGATCGCAAC
TTTGGGGTCG GTGCGGACGG CGTCATTTTT GCGCTGCCCG GCAGCGGCGA CAGCGACTAT
GTCATGCGGA TCTTTAACTC TGACGGTTCA GAACCGGAGA TGTGCGGCAA CGGCATCCGC
TGTTTGGCCA AATTTTTGAG CGAGCTGGAT GGCGGGGCTC AATCCCGCTA TCGCATTGCT
ACCGGTGCTG GCTTGATTGT GCCAACGCTA ACCGAGACTG GCTTAGTCAC TGTCGATATG
GGGCCGGCTT ACCTCAAACC AGTTGAAATC CCGACGACGC TGACAGGTAC TGGCGATCGT
GTCGTCGAAG CAGACTTGGA AGTAGGCGAT CGCCCTTGGA AGGTCACAAC CGTCAGCATG
GGTAACCCCC ACTGCATTAC CTTCGTCGAG GATGTTGCGG CCGTTCCCTT AGCGGAGATC
GGGCCACTGT TTGAGCATCA TCCTGTCTTT CCCCAGCGCA CCAATACTGA GTTTGTCGAG
GTTGTCCGGC CCGACTACCT GAAGATGCGC GTCTGGGAGC GAGGGGCTGG CGCAACCCTA
GCCTGTGGAA CCGGAGCTTG TGCCACCTTG GTCGCGGCTG TCCTGACCGG TCGGAGCGAT
CGCCAAGCGA CGGTGGAACT TCCGGGCGGG CCGCTACAAA TTGAATGGCG AGAAGACGGT
CATCTGTTTA TGACTGGCCC GGCAGTTAAG GTGTTCAGCG GTAGCATGGA ACTAGCTGCC
TAA
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| Protein sequence | MSLQFAKYHG LGNDFILVDN RESGEPRLTP EQAVQVCDRN FGVGADGVIF ALPGSGDSDY
VMRIFNSDGS EPEMCGNGIR CLAKFLSELD GGAQSRYRIA TGAGLIVPTL TETGLVTVDM
GPAYLKPVEI PTTLTGTGDR VVEADLEVGD RPWKVTTVSM GNPHCITFVE DVAAVPLAEI
GPLFEHHPVF PQRTNTEFVE VVRPDYLKMR VWERGAGATL ACGTGACATL VAAVLTGRSD
RQATVELPGG PLQIEWREDG HLFMTGPAVK VFSGSMELAA
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