Gene Synpcc7942_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1924 
Symbol 
ID3775287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2000205 
End bp2000732 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637800366 
Producthypothetical protein 
Protein accessionYP_400941 
Protein GI81300733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.68763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG CCTTAGAACA GTGCGTGGAT GAAGCTCTGC GTCTGGGCTT TCTGACGCCA 
GCCCTCGAAG CCAGCGTCAA CCAAGTCTGC GATCAAGCAA CGGCGCTGTC GGAACTGCAG
CAGTTGGCCT TGCGCCGTTT GATTAGTGCT CTGCGCAGCG GCGAAGTGAT CGTGGTGCCT
CGGCAGCAGC TATTCAACCT GATGGAAGAG CTGGTTTTCT CAGAAGCGAT CGCTCAAGTG
AGTGCCTTTG AGTTGCGCGA GGAAGTCACC CTTGATCTGC CTGCGATCGT CGTCCACGCC
CTCAATCGCT TGCCGCCGCT TTACGCCACC AGCCTCGATC AGGCTCAAAC CCTCCGCCAG
CTGGGCCTGC AGCAGTATCA AGCTCTGATT GCAGCACGGG TTAGCGAAGC TATCTCCTTG
GGTTTTGGTT TGCGATCGTC GGGGCCAAGT ACAGAGGTCG GTCGCGATCG CCAGCCACTA
CTCCTGCAAG TGGCACCGCT GTTGCAGATG CTGGCTCCCG ACGATTAG
 
Protein sequence
MTIALEQCVD EALRLGFLTP ALEASVNQVC DQATALSELQ QLALRRLISA LRSGEVIVVP 
RQQLFNLMEE LVFSEAIAQV SAFELREEVT LDLPAIVVHA LNRLPPLYAT SLDQAQTLRQ
LGLQQYQALI AARVSEAISL GFGLRSSGPS TEVGRDRQPL LLQVAPLLQM LAPDD