Gene Synpcc7942_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1910 
Symbol 
ID3775273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1985741 
End bp1986379 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID637800351 
Productaromatic acid decarboxylase 
Protein accessionYP_400927 
Protein GI81300719 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.640865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCGA CCGATTCCCT TCCCCTCGTG CTAGGGGTCA GCGGAGCCTC GGGCATGATC 
TATGCGGTCC GGGCTCTGCG TCACCTCCTC TTGGCAGATC TGGCGGTTGA CCTTGTCGCC
TCTCGGGCTG CAGCTGAAGT CTGGCGATCG GAATCCCAAA TTCCCTTTCC CTCTGCACCT
GAGCTGCAAG AAAAGTTTTG GCGCGAGCAA GCGGGTGTGC CCGATCGCGG TCATCTGGTC
TGCCATCGCA GCAGCAATGT CGGTGCACGC ATTGCCAGCG GTTCTTTTCG GACGCGAGGC
ATGGTCATCC TGCCCTGCAG CATGAGTACG GTTGGCAAGT TAGCCTCAGG GGTCGGCAGC
GATTTGCTCG AGCGATCGGC AGACGTCCAC CTCAAAGAAG GGCGCTGCTT AGCAGTGGTG
CCACGGGAAA CCCCCTTCAA CCTGATCCAT CTGCGCAACC TCACCACCTT GGCCGAAGCT
GGGGCGCGGA TCGTGCCAGC GATTCCTGCT TGGTACCATC AACCCCAAAC CATCGACGAT
TTGGTGGATT TTGTGGTGGC CCGCGTCTTG GATTGCTTCG GGTTGGACTG TGTTCCTCTC
AATCGTTGGC AGGGCAATGT TGATCTAGCC GAGGATTAG
 
Protein sequence
MSSTDSLPLV LGVSGASGMI YAVRALRHLL LADLAVDLVA SRAAAEVWRS ESQIPFPSAP 
ELQEKFWREQ AGVPDRGHLV CHRSSNVGAR IASGSFRTRG MVILPCSMST VGKLASGVGS
DLLERSADVH LKEGRCLAVV PRETPFNLIH LRNLTTLAEA GARIVPAIPA WYHQPQTIDD
LVDFVVARVL DCFGLDCVPL NRWQGNVDLA ED