Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1910 |
Symbol | |
ID | 3775273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1985741 |
End bp | 1986379 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800351 |
Product | aromatic acid decarboxylase |
Protein accession | YP_400927 |
Protein GI | 81300719 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.640865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCGA CCGATTCCCT TCCCCTCGTG CTAGGGGTCA GCGGAGCCTC GGGCATGATC TATGCGGTCC GGGCTCTGCG TCACCTCCTC TTGGCAGATC TGGCGGTTGA CCTTGTCGCC TCTCGGGCTG CAGCTGAAGT CTGGCGATCG GAATCCCAAA TTCCCTTTCC CTCTGCACCT GAGCTGCAAG AAAAGTTTTG GCGCGAGCAA GCGGGTGTGC CCGATCGCGG TCATCTGGTC TGCCATCGCA GCAGCAATGT CGGTGCACGC ATTGCCAGCG GTTCTTTTCG GACGCGAGGC ATGGTCATCC TGCCCTGCAG CATGAGTACG GTTGGCAAGT TAGCCTCAGG GGTCGGCAGC GATTTGCTCG AGCGATCGGC AGACGTCCAC CTCAAAGAAG GGCGCTGCTT AGCAGTGGTG CCACGGGAAA CCCCCTTCAA CCTGATCCAT CTGCGCAACC TCACCACCTT GGCCGAAGCT GGGGCGCGGA TCGTGCCAGC GATTCCTGCT TGGTACCATC AACCCCAAAC CATCGACGAT TTGGTGGATT TTGTGGTGGC CCGCGTCTTG GATTGCTTCG GGTTGGACTG TGTTCCTCTC AATCGTTGGC AGGGCAATGT TGATCTAGCC GAGGATTAG
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Protein sequence | MSSTDSLPLV LGVSGASGMI YAVRALRHLL LADLAVDLVA SRAAAEVWRS ESQIPFPSAP ELQEKFWREQ AGVPDRGHLV CHRSSNVGAR IASGSFRTRG MVILPCSMST VGKLASGVGS DLLERSADVH LKEGRCLAVV PRETPFNLIH LRNLTTLAEA GARIVPAIPA WYHQPQTIDD LVDFVVARVL DCFGLDCVPL NRWQGNVDLA ED
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