Gene Synpcc7942_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1907 
Symbol 
ID3775270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1983417 
End bp1984493 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content53% 
IMG OID637800348 
Productmagnesium-protoporphyrin IX monomethyl ester cyclase 
Protein accessionYP_400924 
Protein GI81300716 
COG category 
COG ID 
TIGRFAM ID[TIGR02029] magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.256678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.714335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATT CCCTCCAAAA ACCCGAACTC GAAGAATTGC GTCCGGGCAT TAAGGCTCCT 
GCCAAAGAGA CAATCCTGAC GCCTCGCTTT TACACCACTG ACTTTGAAGC GATGGCCAAG
ATGGATCTCT CGCCTAATGA GGATGAGCTA CGGGCCATCT TGGAGGAGTT CCGCGCCGAC
TACAACCGCA AACACTTTGT CCGCACGCCG GAGTTTGATG GTTCAGCCGC TGACATGGAC
CCAGAGACCA AAAAGGTCTT TGTTGAATTC CTAGAGCAGT CCTGCACCTC CGAATTCTCT
GGCTTCCTGC TCTACAAAGA GCTCAGCCGT CGCATCAAAA ACCGTAACCC GCTCTTGGCG
GAATGCTTTG AGTTGATGGC TCGTGATGAA GCTCGCCACG CTGGCTTCCT CAACAAGTCG
ATGAGCGACT TTGATCTGCA GCTCGACCTC GGCTTCCTGA CTGCTAATAA GAAGTACACC
TACTTCAAAC CGGCCTACAT TTTCTATGCC ACCTACCTGA GCGAGAAGAT CGGTTACTGG
CGCTACATCA CGATCTTCCG TCACCTTGAG CAGCATCCGG AATATCGGAT TTACCCGATA
TTCAAGTTCT TTGAGAACTG GTGCCAAGAC GAAAATCGTC ACGGTGACTT CTTCGACGCC
CTGATGAAGG CTCAACCTTC GACGGTGCGT GGCTTTGTTG CCAAACTCTG GTGCCGCTTC
TTCCTGCTGG CAGTCTTCGC AACGATGTAC ATCCGTGACG TCCAGCGTAA AGAGTTCTAC
GAAGCCTTGG GCCTAGATGC CCGTGAGTAC GATCGCCACG TGATCGCCAA GACCAACGAG
ACTTCAGCTC GGGTCTTCCC AGTGGTTCTC GATGTCGATC ATCCCAAGTT CTACGATCGC
CTTGAAACCT GCATCGCCAA CAACAACCAG TTGGCTGCAA TCGAGGCAAC AAGTGCACCT
AAGCCAGTGA AAGTGCTGCG GAAGCTCCCC TACTACCTCT CCAATGGTCT GCAGCTCCTG
AAGCTGTACT TGGTTAAACC GTTGGAGTCA GATGTCTACC AGCCTGCGGT TCGCTAA
 
Protein sequence
MVDSLQKPEL EELRPGIKAP AKETILTPRF YTTDFEAMAK MDLSPNEDEL RAILEEFRAD 
YNRKHFVRTP EFDGSAADMD PETKKVFVEF LEQSCTSEFS GFLLYKELSR RIKNRNPLLA
ECFELMARDE ARHAGFLNKS MSDFDLQLDL GFLTANKKYT YFKPAYIFYA TYLSEKIGYW
RYITIFRHLE QHPEYRIYPI FKFFENWCQD ENRHGDFFDA LMKAQPSTVR GFVAKLWCRF
FLLAVFATMY IRDVQRKEFY EALGLDAREY DRHVIAKTNE TSARVFPVVL DVDHPKFYDR
LETCIANNNQ LAAIEATSAP KPVKVLRKLP YYLSNGLQLL KLYLVKPLES DVYQPAVR