Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1906 |
Symbol | |
ID | 3775269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1982513 |
End bp | 1983253 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637800347 |
Product | hypothetical protein |
Protein accession | YP_400923 |
Protein GI | 81300715 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.32779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.659216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGA CGTCTTCTCA AAAACCTTTT CGGCTACTGG TGGGCGATCG TGAGGTTCAG GAAAGTGACT TAGCAGCACT GCTCCAAAAG CATCAACTCC TTCCAGAACT CGTCAAACGC ATGCGCTTTG CGCAAGTTAT TGAGGGGATT GAAGTCCAGC CCGATGTCCT TGAGCAGGAA TGTCAGGCCT GGTGTAAGCA GAATGGCATT GCTCCACAAC AGTTACCCCA ACTGCTAGCG CAGCAGCAAA TCTCGCTTGA GCAATGGATG TCATCGGTTG AAAATCGATT GCGCCTGCGC CTCTTTCAAG AACGTGAATT TAGCCACCGC GCTGAAAATC GCTTTCTCAA GCGGAAGAGC CAGTTGGATC TGGTGACCTA CTCCTTACTC CGGCATTCGG ATGGCCATCT CATTCAGGAG CTCTACCAGC AACTCTTGCA TGGAGAAGCT ACGTTTGAGG ATTTGGCAAC TCAATTTTCG CAAGGCCATG AGGCTAAGAC GGCAGGTAAG TTGGGCCCTG TACCCTTGAG TCAGCCCCAT CCAGCTCTTG CTGAAGTCTT GCGTACCGCC CAACCAGGGC AGATTCTCCC ACCCCGGAAT CTGGAATCTT ACTGGTTGAT TATCCGCCTC GATCAGCTGC AGCCAGTGGC ATTTAATGAG ACAATTCGCC GGCAGATGCT GCAGGAATTG TTTGATGAAT GGTTAGGTGC GGAAGTTCAG CAAACACTAA ATACTCTGTA A
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Protein sequence | MTLTSSQKPF RLLVGDREVQ ESDLAALLQK HQLLPELVKR MRFAQVIEGI EVQPDVLEQE CQAWCKQNGI APQQLPQLLA QQQISLEQWM SSVENRLRLR LFQEREFSHR AENRFLKRKS QLDLVTYSLL RHSDGHLIQE LYQQLLHGEA TFEDLATQFS QGHEAKTAGK LGPVPLSQPH PALAEVLRTA QPGQILPPRN LESYWLIIRL DQLQPVAFNE TIRRQMLQEL FDEWLGAEVQ QTLNTL
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