Gene Synpcc7942_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1893 
Symbol 
ID3775256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1965754 
End bp1966530 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content57% 
IMG OID637800334 
ProductATPase 
Protein accessionYP_400910 
Protein GI81300702 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0578772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCTG AGTCTTGGCT ATTGGAAGCT GAAGGACTGA GTAAGCGCTT TGGCGGCTTG 
CAGGCGGTTC AGGATGTGCG GCTGCAGGTG GCTGAGGGGA CAATCACCGG TTTGATTGGT
CCGAACGGAG CGGGCAAGTC CACCCTATTT GCCCTGCTCT CGAACTTCCT CAAGGCAGAT
GCCGGAAAGG TGCGGTTTCG GGGCCGTGCG ATCGAGAAGC TGCAGCCCTA CCAATTGGCG
CAGTTAGGTC TGGTGCGGAC GTTTCAGGTG GCGCGATCGC TCTCCCGCCT GACGGTGCTA
GAGAACATGT TGCTGGGCGG GCAACAACAG CGCGGGGAAA AGTTTTGGCA GGTTTGGCTC
CACCCCCAAG CGATTCGTCG TCAAGAGCAA GAGCTGCGCG ATCGCGCGTT CTCCCTCCTC
AGTGATGTGG GGTTGGCTGC TAAAGCGCAG GACTACGCCG GCAGTCTTTC GGGTGGGCAA
CGCAAACTAC TAGAAATGGC GCGAGCGCTA ATGGCGCAGC CGCAGCTCGT GCTGTTGGAT
GAACCGGCCG CCGGGGTCAA CCCAGCACTG ATCGAAAAAA TCTGTGATCA CATCCAAACC
TGGAATCAGC AGGGTATTAG TTTCTTGATC ATCGAACACA ATATGGACGT GATCATGTCG
CTCTGCGATC GCGTTTGGGT GTTGGCCGAG GGCAAAAACC TTGTGGATGG TCCGCCTGCC
CAGATTCAAC AGGATGAACA GGTTTTGGCA GCCTATTTGG GACTGGAACT TGCCTGA
 
Protein sequence
MAAESWLLEA EGLSKRFGGL QAVQDVRLQV AEGTITGLIG PNGAGKSTLF ALLSNFLKAD 
AGKVRFRGRA IEKLQPYQLA QLGLVRTFQV ARSLSRLTVL ENMLLGGQQQ RGEKFWQVWL
HPQAIRRQEQ ELRDRAFSLL SDVGLAAKAQ DYAGSLSGGQ RKLLEMARAL MAQPQLVLLD
EPAAGVNPAL IEKICDHIQT WNQQGISFLI IEHNMDVIMS LCDRVWVLAE GKNLVDGPPA
QIQQDEQVLA AYLGLELA