Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1893 |
Symbol | |
ID | 3775256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1965754 |
End bp | 1966530 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800334 |
Product | ATPase |
Protein accession | YP_400910 |
Protein GI | 81300702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0578772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCGCTG AGTCTTGGCT ATTGGAAGCT GAAGGACTGA GTAAGCGCTT TGGCGGCTTG CAGGCGGTTC AGGATGTGCG GCTGCAGGTG GCTGAGGGGA CAATCACCGG TTTGATTGGT CCGAACGGAG CGGGCAAGTC CACCCTATTT GCCCTGCTCT CGAACTTCCT CAAGGCAGAT GCCGGAAAGG TGCGGTTTCG GGGCCGTGCG ATCGAGAAGC TGCAGCCCTA CCAATTGGCG CAGTTAGGTC TGGTGCGGAC GTTTCAGGTG GCGCGATCGC TCTCCCGCCT GACGGTGCTA GAGAACATGT TGCTGGGCGG GCAACAACAG CGCGGGGAAA AGTTTTGGCA GGTTTGGCTC CACCCCCAAG CGATTCGTCG TCAAGAGCAA GAGCTGCGCG ATCGCGCGTT CTCCCTCCTC AGTGATGTGG GGTTGGCTGC TAAAGCGCAG GACTACGCCG GCAGTCTTTC GGGTGGGCAA CGCAAACTAC TAGAAATGGC GCGAGCGCTA ATGGCGCAGC CGCAGCTCGT GCTGTTGGAT GAACCGGCCG CCGGGGTCAA CCCAGCACTG ATCGAAAAAA TCTGTGATCA CATCCAAACC TGGAATCAGC AGGGTATTAG TTTCTTGATC ATCGAACACA ATATGGACGT GATCATGTCG CTCTGCGATC GCGTTTGGGT GTTGGCCGAG GGCAAAAACC TTGTGGATGG TCCGCCTGCC CAGATTCAAC AGGATGAACA GGTTTTGGCA GCCTATTTGG GACTGGAACT TGCCTGA
|
Protein sequence | MAAESWLLEA EGLSKRFGGL QAVQDVRLQV AEGTITGLIG PNGAGKSTLF ALLSNFLKAD AGKVRFRGRA IEKLQPYQLA QLGLVRTFQV ARSLSRLTVL ENMLLGGQQQ RGEKFWQVWL HPQAIRRQEQ ELRDRAFSLL SDVGLAAKAQ DYAGSLSGGQ RKLLEMARAL MAQPQLVLLD EPAAGVNPAL IEKICDHIQT WNQQGISFLI IEHNMDVIMS LCDRVWVLAE GKNLVDGPPA QIQQDEQVLA AYLGLELA
|
| |