Gene Synpcc7942_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1892 
Symbol 
ID3775255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1964969 
End bp1965778 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content55% 
IMG OID637800333 
Productrhodanese-like protein 
Protein accessionYP_400909 
Protein GI81300701 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0917169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG TTCTCATCAA CTTCTATCGT TTCGTTGCGC TTGGAGACTG CGATCGCTGG 
CGACAGTGGC TGCAGGATCT CTGCACGGCG CTGGGCTTAC GAGGCACGAT TTTGCTGGCC
CCTGAAGGCA TTAACGCCGG CTTAGCGGGC AACACTGAAG CGATCGCTCA ATTCCTGTCG
GAACTCCAGC AGCATCCTCC CTTCGCCAAC CTCAGCTTCA AATCTGCCAC GGTCACCGAT
TGGCCTTTTG CCCGACTCAA GGTGAAGGTG AAACCTGAGA TTGTCAGTTT GGGTTGTCCC
GAATTGAACC CAGCAGAACG GACAGGCACC CTCGTCGCCC CCCAGGACTG GAACCAATTG
CTACAAGACC CTGAGGTTGT GCTGATTGAT GTGCGCAACC GCTTTGAGAT TGCTCTCGGT
AGTTTCCCTC GGGCAATCGA TCCTCAGACC GATCGCTTCC GTGACTTTCC ACGCTTTGTG
CAAGAGCAAC TCTTACCGCA GCCGCCAGCG AAGGTTGCCA TGTTTTGCAC TGGCGGTATC
CGTTGTGAGA AGGCCTCTGC CTATCTCCTA GAACAGGGTA TCGAAACGGT TTATCAGCTA
GAAGGCGGAA TTCTTAACTA TCTGGAAGCG ATCGCGCCAG AAGAGAATCA CTGGCAAGGG
GACTGCTTCG TTTTTGATGA GCGAATTGCC GTCGATCGCC AGCTCCAAAC ACCCCAGCAT
CAACTCTGCC CAGCCTGTGG TCAGCCTGTG GTCGCAACAA CCTGTTCCCA CTGCCAAGAC
TCCGTTCAGG CAAGTTCCAG TCCCAAATAG
 
Protein sequence
MSLVLINFYR FVALGDCDRW RQWLQDLCTA LGLRGTILLA PEGINAGLAG NTEAIAQFLS 
ELQQHPPFAN LSFKSATVTD WPFARLKVKV KPEIVSLGCP ELNPAERTGT LVAPQDWNQL
LQDPEVVLID VRNRFEIALG SFPRAIDPQT DRFRDFPRFV QEQLLPQPPA KVAMFCTGGI
RCEKASAYLL EQGIETVYQL EGGILNYLEA IAPEENHWQG DCFVFDERIA VDRQLQTPQH
QLCPACGQPV VATTCSHCQD SVQASSSPK