Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1875 |
Symbol | |
ID | 3775238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1946701 |
End bp | 1948101 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800316 |
Product | hypothetical protein |
Protein accession | YP_400892 |
Protein GI | 81300684 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTCG ATTTTGATAC TGCCCGTCAG CAGCTAGACG ACCTCATTCA CCGTTATCGC GATCGCGCTG ATTTTCTGGC GATTCGCCTC GAAGAATCCC AGGCAACGGA CATTGCCCTG CGGGGCGATC GCTTTGAAAC CCTCAGTGAA AGTTTGGCGG TGGGTGGTCA GGTTCGGGCT TGCTGGAAAG GCGGTTGGGG CTTCGCCAGT TTCAATCGCC TCAGTCAATT GGAAGAACGA CTGCAAGAGG CGATCGCGGC GGCTCGCTTG ATCGGCACGG AAACCACGGA ACTCGCACCG GTTGATCCGG TACGGGCAAT TTGGACGGCA CCGCTCACAG GGCGATCGCC GGACCAAGTG GCGCTGGCAG AGAAGAAGGC GCTCTGCCAG CACTACACCG AGATTTTGCG CAGTGGCGAT CGCCGCATTG CCAGTACGAG TGTGCGTTAC GGCGACAGTC ACCAGCGGTT GCTGTTGGCA ACCTCGGAAG GCACCTTGCT AGAACAGTCT TGGTCAGACT GGGAAATGCG CTTTGCCGCG ACAGCTCGCG AGGGCGATCG CGTTCAGACA GGGCGTGAGA CGACTGGCTC GCGGCGCGGC TGGGAAGATC TGCTGGGTCT GGATGGGGCT GTGCAGGGGG CTCGCGATCG GGCGCTGCAA TCGCTTTCGC TGCCGGTTGT GGAAGCGGGG ACTTATACGG TCGTTATTGA TCCGATCCTG ACGGGGCTGT TTGTCCACGA AGCTTTTGGC CATCTGTCGG AAGCGGATAT GGCCTACGAA AATCCTGAGC TGCTGGAAGT GATGAGCTTA GGCCGTCGCT TTGGCCCAGA GACCCTACAA ATTTTTGATG GTGCCGCCCC TGAGGGACAT CGCGGCAGCT ATGCCTATGA CGATGAAGGT GTTCCCGCTA GCACGACGGC TTTAATTACG GATGGTGTCC TCACAGGGCG CCTGCATTCT CGGGAAACGG CTGGAAAACT CGGGGAAGCG CCCACCGGCA ATGCCCGCTG CTTGGATTTT CACTATCCGC CGATCGTGCG GATGACCAAT ACTTGGATTG CGCCGGGAAC AACGCCGGCA GCCGATCTGA TCCAAGGCAT TGAGCAGGGT GTCTTCGCCC GCAATTGGCT GGGTGGCATG ACCAATGGTG AGATGTTCAC CTTCTCGGCG GGCGAGGCTT GGATGATTCG TAATGGTGAG CTGGCGGAGC CGGTGCGTGA TGTCACGCTC TCAGGCAATG TGTTCTCGAC CCTAGCGGCG ATCGAAGCGA TCGGTGATGA CTTTGTCTGG GATGAGTCGG GCGGCTGTGG CAAGGGTGGC CAGAGTGGTT TGCCCGTTGG CTGCGGTGGT CCGAGCCTGC GAATTCGGGA TGTCGTCGTC GGTGGCGAAG CGAGTGATTA A
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Protein sequence | MTLDFDTARQ QLDDLIHRYR DRADFLAIRL EESQATDIAL RGDRFETLSE SLAVGGQVRA CWKGGWGFAS FNRLSQLEER LQEAIAAARL IGTETTELAP VDPVRAIWTA PLTGRSPDQV ALAEKKALCQ HYTEILRSGD RRIASTSVRY GDSHQRLLLA TSEGTLLEQS WSDWEMRFAA TAREGDRVQT GRETTGSRRG WEDLLGLDGA VQGARDRALQ SLSLPVVEAG TYTVVIDPIL TGLFVHEAFG HLSEADMAYE NPELLEVMSL GRRFGPETLQ IFDGAAPEGH RGSYAYDDEG VPASTTALIT DGVLTGRLHS RETAGKLGEA PTGNARCLDF HYPPIVRMTN TWIAPGTTPA ADLIQGIEQG VFARNWLGGM TNGEMFTFSA GEAWMIRNGE LAEPVRDVTL SGNVFSTLAA IEAIGDDFVW DESGGCGKGG QSGLPVGCGG PSLRIRDVVV GGEASD
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