| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1872 |
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| Symbol | |
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| ID | 3775235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1943951 |
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| End bp | 1945399 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637800313 |
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| Product | histidine kinase |
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| Protein accession | YP_400889 |
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| Protein GI | 81300681 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCC ATATTCAATC AATTTTTAAC AAGCTTGGAG GAAGTCGAGT TGCTACAAAC
TCTTTACAAT TTAGGCTGAC TCTTGAGCTG ACCTTAATCT CCGCATTAGG TGTATGCAGC
ATCACCTTGT GGTCATCTTG GCGATTAGAA CAAACTCTGA TTAATGGCTA CAAACAAAAT
TTGAGTTATA TTTCTGATAG TTTTCCTGAA ATAATTAAGA TCAGTAGTCT CAATGATTCC
ATTCAACTAG AGCTTGAACG GTCGATCGCC CAAGTTTCTA AACCGAGGCT CCTCATTTGG
GTTCGCAGCC CTAGAGGGGA ACTTTTAGCG CGATCGAGAG GGATGAATAT TCCCTCAAGT
GATCTGATTG AAGTGGCTAA CAAGTTACCC GCATCGAATG ATCCTAAAGT TTTTCAGATA
CAGCAGCAGT CTTTTATTCT CGCTCAGACT GCTCTAAGTC TTGATGGAAA TCCTATTGGA
AATGTATATT GGCTTCAAGA TATTACAGAA GATCAAAGAC AGTTAGATTC TTTGTTTAGT
CAACTACAGC TAGGCAGTAT TTTACTGGTT TTTACCTTGA TTGTTGTGAT AGCTAGTCGA
ATCCGTAGAG CAATGGCTCC AATTAAGGAG ATCAGCCAGA TTGCTAGTAA CATTTCAATC
ATTGATCTCG GAGCTGATCC TCTTGAACTT CGCCACGCTC CCGAGGAAAT TTTAGGGCTT
GCAAAGGCAT TCAATGACAT GTTGAATCGT CTATCGATCA GTTGGGAGCA ACAACAACAG
TTTGTAGGTA ATGTTTCCCA TGAGTTAAAA ACGCCCCTCA CAGTGATTTC AGGATATCTG
CAAAGTCTTT TGAGAAGAGG TGACAATCTT AATTCTTATC AAAATCAAGC CCTAGAAACA
GCATCTGCAG AAGCTGAAAG AACGATTCGA ATGCTTCAAG ATTTACTAGA TCTTGCAAGA
GTTGATAGCG GCAATCTGCA TTTCCGCTTA ATGCCGACTG TGTTAAATAC TTTGATAGCA
GAAGTTGCTG AGATGACACG ACGTGTCACT GGGCGTCAAA TTATTATGCA AACCCCTAAG
AGTGAAATTG TTGTCTACGC TGATCAAAAT CGTTTAGAGC AAGCTTTGAT CAATCTGCTA
GATAACGCAG CCAAATATTC GAATCAAGAT CAAGTGGTCT ACATTAATTT AGAGCAGTCT
AATCAACAGA CCTTAATTCA CATAATCGAT CAAGGAGTAG GAATTCCTCT TGCTCACCAA
AGTCGCATTT TTGAGCGATT TTACCGAGTG GATGAAGCCA TGACACGATC GCGTGATGGA
ACTGGGCTAG GATTAGCAAT TGCCAAAAGC TTGATTGAAG GCATGCAGGG CAAAATTACG
CTGCGGTCTA AACTAGGGGA AGGCAGTACT TTCACCATCA TCTTACCCAA CTGGGAATCC
TTGCCATGA
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| Protein sequence | MFRHIQSIFN KLGGSRVATN SLQFRLTLEL TLISALGVCS ITLWSSWRLE QTLINGYKQN
LSYISDSFPE IIKISSLNDS IQLELERSIA QVSKPRLLIW VRSPRGELLA RSRGMNIPSS
DLIEVANKLP ASNDPKVFQI QQQSFILAQT ALSLDGNPIG NVYWLQDITE DQRQLDSLFS
QLQLGSILLV FTLIVVIASR IRRAMAPIKE ISQIASNISI IDLGADPLEL RHAPEEILGL
AKAFNDMLNR LSISWEQQQQ FVGNVSHELK TPLTVISGYL QSLLRRGDNL NSYQNQALET
ASAEAERTIR MLQDLLDLAR VDSGNLHFRL MPTVLNTLIA EVAEMTRRVT GRQIIMQTPK
SEIVVYADQN RLEQALINLL DNAAKYSNQD QVVYINLEQS NQQTLIHIID QGVGIPLAHQ
SRIFERFYRV DEAMTRSRDG TGLGLAIAKS LIEGMQGKIT LRSKLGEGST FTIILPNWES
LP
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