Gene Synpcc7942_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1871 
Symbol 
ID3775234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1943308 
End bp1943841 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID637800312 
Producthypothetical protein 
Protein accessionYP_400888 
Protein GI81300680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA GCTATCTTCT GATCTGCAGT TTGGTCGGCC TAGCATCTGT TAGCGTTGTT 
ACCCGCCTAG AAGCTGCAAC CTCTACTCAA TCTGTCGAAA CTTCTATCAG TCATTCTAGG
CTCGCTCAAG CAACCACTCG TTTTCCAGCC GTTTACAACG AGAATGGTAT TGCTTTAGAT
GGCCAAGATG TTGTTGCATA TTTTCGAAGC AATTCACTCG TTCAAGGGAG TCCAAAATTT
ACTCACACTT GGAATGGTGT AAAGTGGCAG TTCTCAAGCA CAATGAATCG TGACTTATTC
GCAAAAAACC CAACTAAATA TGCTCCGCAG TACGGCGGTT ATTGCGCTAA AGCAGCATCT
GCAGGTGTTT TAGCTACAAC GATTCCTAAT GCTTGGGAAA TTCGCGATGG CAAGCTTTAC
CTTAATTACA GTTTAGAAGC CCAGAAGGAA TGGAAGCAAG ACACAGCAAC TAAAATTGTA
AAAGCAAATG CGAATTGGCC TAAAATTCTC AACAATGACA CCCTAAAAAG ATAG
 
Protein sequence
MKLSYLLICS LVGLASVSVV TRLEAATSTQ SVETSISHSR LAQATTRFPA VYNENGIALD 
GQDVVAYFRS NSLVQGSPKF THTWNGVKWQ FSSTMNRDLF AKNPTKYAPQ YGGYCAKAAS
AGVLATTIPN AWEIRDGKLY LNYSLEAQKE WKQDTATKIV KANANWPKIL NNDTLKR