Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1864 |
Symbol | |
ID | 3775227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1934588 |
End bp | 1935175 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800305 |
Product | hypothetical protein |
Protein accession | YP_400881 |
Protein GI | 81300673 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.791662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGTC TTTCGTTAGC GGCAGTAATC ACAGCGGCGC AAGCCGGTCA GGTGATTAGT TTTCCCACCG ATACGCTGCC CGCCCTAGCA GTTCAACCAG ATCAGGCGGC GCAAATCTAT CGACTCAAGC AACGCCCCTC CGAAAAACCC CTGATTCTGA TGGCCGCGAC GGCAGCAGAA CTATGGCCGT TCGCCCAAGG GAGTCCTGAG GATCAGGCGC AGTGGAATGC GATTGCTAAT CAATATTGGC CAGGCGCCTT GACGCTGGTT CTCCCAGCCA GCGATCGCCT ACCCGCAGCT GTTAATCCCC TCGATCGCAG CAGTATTGGA CTCCGCATTC CCGCCTGTGC GCTCGCCCGT CAAATTTTGG CTGAAACAGG GCCACTGGCG ACTACCAGTG CCAACCGTTC TGGAGAACCG GCCTTACTAG ACCCAGATGC GATCGCAGCG GAATTTCCTG AGGTCACCGT TTTGGCCGAG GATCCCTGGC CGGATCCATC TGGCCTCGCC TCGACAGTCG TGCGCTGGCA AGCCGATGGA CAATGGCAAG TTCTGCGGCA GGGCAGCATT GTTCTGGGGG AGGTGTGA
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Protein sequence | MVRLSLAAVI TAAQAGQVIS FPTDTLPALA VQPDQAAQIY RLKQRPSEKP LILMAATAAE LWPFAQGSPE DQAQWNAIAN QYWPGALTLV LPASDRLPAA VNPLDRSSIG LRIPACALAR QILAETGPLA TTSANRSGEP ALLDPDAIAA EFPEVTVLAE DPWPDPSGLA STVVRWQADG QWQVLRQGSI VLGEV
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