Gene Synpcc7942_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1864 
Symbol 
ID3775227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1934588 
End bp1935175 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content59% 
IMG OID637800305 
Producthypothetical protein 
Protein accessionYP_400881 
Protein GI81300673 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.791662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTC TTTCGTTAGC GGCAGTAATC ACAGCGGCGC AAGCCGGTCA GGTGATTAGT 
TTTCCCACCG ATACGCTGCC CGCCCTAGCA GTTCAACCAG ATCAGGCGGC GCAAATCTAT
CGACTCAAGC AACGCCCCTC CGAAAAACCC CTGATTCTGA TGGCCGCGAC GGCAGCAGAA
CTATGGCCGT TCGCCCAAGG GAGTCCTGAG GATCAGGCGC AGTGGAATGC GATTGCTAAT
CAATATTGGC CAGGCGCCTT GACGCTGGTT CTCCCAGCCA GCGATCGCCT ACCCGCAGCT
GTTAATCCCC TCGATCGCAG CAGTATTGGA CTCCGCATTC CCGCCTGTGC GCTCGCCCGT
CAAATTTTGG CTGAAACAGG GCCACTGGCG ACTACCAGTG CCAACCGTTC TGGAGAACCG
GCCTTACTAG ACCCAGATGC GATCGCAGCG GAATTTCCTG AGGTCACCGT TTTGGCCGAG
GATCCCTGGC CGGATCCATC TGGCCTCGCC TCGACAGTCG TGCGCTGGCA AGCCGATGGA
CAATGGCAAG TTCTGCGGCA GGGCAGCATT GTTCTGGGGG AGGTGTGA
 
Protein sequence
MVRLSLAAVI TAAQAGQVIS FPTDTLPALA VQPDQAAQIY RLKQRPSEKP LILMAATAAE 
LWPFAQGSPE DQAQWNAIAN QYWPGALTLV LPASDRLPAA VNPLDRSSIG LRIPACALAR
QILAETGPLA TTSANRSGEP ALLDPDAIAA EFPEVTVLAE DPWPDPSGLA STVVRWQADG
QWQVLRQGSI VLGEV