Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1858 |
Symbol | |
ID | 3775221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1926893 |
End bp | 1927609 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637800299 |
Product | Heme oxygenase (decyclizing) |
Protein accession | YP_400875 |
Protein GI | 81300667 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5398] Heme oxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.206398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGA ATCTAGCAAC CAAACTGCGT GAAGGCACCA AAAAGGCACA CACCATGGCC GAAAACGTCG GCTTTGTGAA GTGCTTCCTC AAAGGGGTTG TCGAGAAAAA CTCCTACCGT AAGCTGGTCG CGAACCTCTA CTTCGTCTAC TCCGCCATGG AAGAGGAGCT TGAACGCCAT CGCGACAACG ACAAAATTGC AGGCATCTAC TTTCCTGTGC TGAATCGGAA GACCAGCCTT GAGCGGGATC TCGCCTTCTA CTACGGTGAA GATTGGCGGC AACAAATCCA ACCTTCCAAA GCAGCCCAAT CCTACGTAGC TCGTATTCGG GAGGTCTCCA ACACTGCACC TGAGCTATTG GTTGGCCATG CCTATACTCG CTATCTGGGC GACCTGTCGG GCGGTCAAAT CTTGAAAACG ATCGCGCAAC GCGGCATGAA CTTGGACGGG GCAGGCACCG CCTTCTACGA GTTCGAAGCG ATTGAAGATG AAAAAGCCTT CAAACAAACC TATCGGCAAG CCATGGACAC GTTGCCAGTT GATGAAGCAA CCGCCGATCG CATTGTTGAA GAAGCCAATG ATGCTTTTGG GATGAATATG GCCATGTTCC AAGAGCTAGA AGGAAATCTT GTCGCAGCGA TCGGCAAGAT GTTCTTTAAT TCCCTGACAC GCCGTTTTGT ACGCGGCAGC ACAGAGTTAG CAACTGCAGC CGAATAA
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Protein sequence | MGANLATKLR EGTKKAHTMA ENVGFVKCFL KGVVEKNSYR KLVANLYFVY SAMEEELERH RDNDKIAGIY FPVLNRKTSL ERDLAFYYGE DWRQQIQPSK AAQSYVARIR EVSNTAPELL VGHAYTRYLG DLSGGQILKT IAQRGMNLDG AGTAFYEFEA IEDEKAFKQT YRQAMDTLPV DEATADRIVE EANDAFGMNM AMFQELEGNL VAAIGKMFFN SLTRRFVRGS TELATAAE
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