Gene Synpcc7942_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1858 
Symbol 
ID3775221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1926893 
End bp1927609 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID637800299 
ProductHeme oxygenase (decyclizing) 
Protein accessionYP_400875 
Protein GI81300667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5398] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.206398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA ATCTAGCAAC CAAACTGCGT GAAGGCACCA AAAAGGCACA CACCATGGCC 
GAAAACGTCG GCTTTGTGAA GTGCTTCCTC AAAGGGGTTG TCGAGAAAAA CTCCTACCGT
AAGCTGGTCG CGAACCTCTA CTTCGTCTAC TCCGCCATGG AAGAGGAGCT TGAACGCCAT
CGCGACAACG ACAAAATTGC AGGCATCTAC TTTCCTGTGC TGAATCGGAA GACCAGCCTT
GAGCGGGATC TCGCCTTCTA CTACGGTGAA GATTGGCGGC AACAAATCCA ACCTTCCAAA
GCAGCCCAAT CCTACGTAGC TCGTATTCGG GAGGTCTCCA ACACTGCACC TGAGCTATTG
GTTGGCCATG CCTATACTCG CTATCTGGGC GACCTGTCGG GCGGTCAAAT CTTGAAAACG
ATCGCGCAAC GCGGCATGAA CTTGGACGGG GCAGGCACCG CCTTCTACGA GTTCGAAGCG
ATTGAAGATG AAAAAGCCTT CAAACAAACC TATCGGCAAG CCATGGACAC GTTGCCAGTT
GATGAAGCAA CCGCCGATCG CATTGTTGAA GAAGCCAATG ATGCTTTTGG GATGAATATG
GCCATGTTCC AAGAGCTAGA AGGAAATCTT GTCGCAGCGA TCGGCAAGAT GTTCTTTAAT
TCCCTGACAC GCCGTTTTGT ACGCGGCAGC ACAGAGTTAG CAACTGCAGC CGAATAA
 
Protein sequence
MGANLATKLR EGTKKAHTMA ENVGFVKCFL KGVVEKNSYR KLVANLYFVY SAMEEELERH 
RDNDKIAGIY FPVLNRKTSL ERDLAFYYGE DWRQQIQPSK AAQSYVARIR EVSNTAPELL
VGHAYTRYLG DLSGGQILKT IAQRGMNLDG AGTAFYEFEA IEDEKAFKQT YRQAMDTLPV
DEATADRIVE EANDAFGMNM AMFQELEGNL VAAIGKMFFN SLTRRFVRGS TELATAAE