Gene Synpcc7942_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1856 
Symbol 
ID3775219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1925324 
End bp1925830 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content54% 
IMG OID637800297 
ProducttRNA-adenosine deaminase 
Protein accessionYP_400873 
Protein GI81300665 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.489212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC CTCCTCCACC GTCGATCGCG AATCCCGAAT ACGAAACCCA TCATCGCTGG 
ATGACGATCG CCTACGAGCA GGCAGTGATC GCAGGGACAG CAGGCGAAAT ACCAATTGGC
GCAGTGATTG TCCATCAAGG GCACCTGTTA GCCACCGGAC AAAACCGTCG CGAACGCGAT
CGTGACCCCT GTGGCCATGC AGAGATAATA GCGATTCGGG CAGCAGCAGC TCGGATCGGT
GATTGGCGCC TTAGTGACTG TCAGCTTTAC GTCACTCTTG AACCCTGCCC TATGTGCGCA
GGAGCTATCA TTCAGGCTAG GCTTGGGCAA TTGATTTATG CCGCTGATGA CCCCAAAGCT
GGGGCAATTC GATCGCTCCT CAATTTACCT GATAGTCCAG TCTCCCATCA TCATTTATCT
GTCCTGGCTG GCATCTTAGC TGAGCCTTGT GGACAGCTTC TCCGTGACTG GTTTCAGCAA
CGGAGATCGC GATCTACTGG TGAATAG
 
Protein sequence
MAAPPPPSIA NPEYETHHRW MTIAYEQAVI AGTAGEIPIG AVIVHQGHLL ATGQNRRERD 
RDPCGHAEII AIRAAAARIG DWRLSDCQLY VTLEPCPMCA GAIIQARLGQ LIYAADDPKA
GAIRSLLNLP DSPVSHHHLS VLAGILAEPC GQLLRDWFQQ RRSRSTGE