Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1853 |
Symbol | |
ID | 3774428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1921478 |
End bp | 1922182 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637800294 |
Product | cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase |
Protein accession | YP_400870 |
Protein GI | 81300662 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2243] Precorrin-2 methylase |
TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.254503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTA CTGGTCGTCT CTACGGGCTC GGCATTGGGC CTGGCGATCC AGAGCTACTG ACGCTCAAAG CCTATCGGAT TCTTAAGCAA GTGCCTGTGA TTGCTTATCC GACGCTAGAG AATGGCAAGG CCCTAGCGCG ATCAATCGTT GCAGATTATA TCCGCACAGA TCAGATTGAA ATTCCCATGC CTCTGCCCTT CAGTGTGGAG CGATCATCAC AACCCTATTA CGATCAAGCA GCGATTAAGA TTGCTCAGCA TTTAACCGCA GGACAAGACG TAGCTGTTCT CTGCGAAGGT GACCCCATGC TATATGGAAC CTTCATGTAT TTATTTAATC GCCTTGCCGA CCAGTTTCAG ACTGAAGTGG TGCCTGGTAT TTCCTCAACC TTTGCGAGTG CAGCCATGTT AGGGGCACCG ATCACCTATC GAAATGATGT CTTGAGCATC ATGCCAGCGA CCCTAGATGC AGAGACCTTA CGCGATCGCC TAAGTCAGGT TGACTCTGCA ATTATTATCA AACTTGGCCG TCATTTTGCC AAAGTTAAAT CTATTTTAGC TGAGCTTAAT CTTCTTGATC GAGCACGTTA TATTGAGCGG GCAACTCAAG CAAATCAGCA GATCCTAGAC ATTAAAACGG TTGACCCTCA GGCAGTTCCC TACTGGGCAC TTATTTTAAT TCCTAGCCAG ACTCAGCCCC AATGA
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Protein sequence | MSSTGRLYGL GIGPGDPELL TLKAYRILKQ VPVIAYPTLE NGKALARSIV ADYIRTDQIE IPMPLPFSVE RSSQPYYDQA AIKIAQHLTA GQDVAVLCEG DPMLYGTFMY LFNRLADQFQ TEVVPGISST FASAAMLGAP ITYRNDVLSI MPATLDAETL RDRLSQVDSA IIIKLGRHFA KVKSILAELN LLDRARYIER ATQANQQILD IKTVDPQAVP YWALILIPSQ TQPQ
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