Gene Synpcc7942_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1853 
Symbol 
ID3774428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1921478 
End bp1922182 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content48% 
IMG OID637800294 
Productcobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase 
Protein accessionYP_400870 
Protein GI81300662 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.254503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTA CTGGTCGTCT CTACGGGCTC GGCATTGGGC CTGGCGATCC AGAGCTACTG 
ACGCTCAAAG CCTATCGGAT TCTTAAGCAA GTGCCTGTGA TTGCTTATCC GACGCTAGAG
AATGGCAAGG CCCTAGCGCG ATCAATCGTT GCAGATTATA TCCGCACAGA TCAGATTGAA
ATTCCCATGC CTCTGCCCTT CAGTGTGGAG CGATCATCAC AACCCTATTA CGATCAAGCA
GCGATTAAGA TTGCTCAGCA TTTAACCGCA GGACAAGACG TAGCTGTTCT CTGCGAAGGT
GACCCCATGC TATATGGAAC CTTCATGTAT TTATTTAATC GCCTTGCCGA CCAGTTTCAG
ACTGAAGTGG TGCCTGGTAT TTCCTCAACC TTTGCGAGTG CAGCCATGTT AGGGGCACCG
ATCACCTATC GAAATGATGT CTTGAGCATC ATGCCAGCGA CCCTAGATGC AGAGACCTTA
CGCGATCGCC TAAGTCAGGT TGACTCTGCA ATTATTATCA AACTTGGCCG TCATTTTGCC
AAAGTTAAAT CTATTTTAGC TGAGCTTAAT CTTCTTGATC GAGCACGTTA TATTGAGCGG
GCAACTCAAG CAAATCAGCA GATCCTAGAC ATTAAAACGG TTGACCCTCA GGCAGTTCCC
TACTGGGCAC TTATTTTAAT TCCTAGCCAG ACTCAGCCCC AATGA
 
Protein sequence
MSSTGRLYGL GIGPGDPELL TLKAYRILKQ VPVIAYPTLE NGKALARSIV ADYIRTDQIE 
IPMPLPFSVE RSSQPYYDQA AIKIAQHLTA GQDVAVLCEG DPMLYGTFMY LFNRLADQFQ
TEVVPGISST FASAAMLGAP ITYRNDVLSI MPATLDAETL RDRLSQVDSA IIIKLGRHFA
KVKSILAELN LLDRARYIER ATQANQQILD IKTVDPQAVP YWALILIPSQ TQPQ