Gene Synpcc7942_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1852 
SymbolcobH 
ID3774427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1920852 
End bp1921481 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID637800293 
Productprecorrin-8X methylmutase 
Protein accessionYP_400869 
Protein GI81300661 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.334862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.809538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT ACATTCGGAA TGGCACTGAC ATCTATAAAA AGTCTTTTTG CATTATTCGT 
GAAGAGGCTT GTCTTAGCCA TTTGCCAGAG GACTTGGCTA CGGTTGTAGT CCGTCTCATC
CACGCTTGTG GGATGACTGA CATTGTTCAA GACTTTGAAG CCTCAGCTAC AGCATTAGTT
TCAGGACGTC AAGCACTCAA GGATGGATGT CCTATTCTTT GTGATTCTCA AATGGTCGCC
AATGGCATTA CCCGTAAGCG ATTACCTGCT GAGAATCCAG TGATTTGTAC CTTGAATGAA
CCCGAAGTGC CCGCGATCGC ACAGCAAATT AACAACACTC GCTCAGCTGC AGCAATGGAG
CTATGGCGAT CGCAATTACA GGGTTCAGTT GTTGTCATTG GCAATGCACC CACCGCGCTC
TTTCGCTTAC TGGAAATCCT TGATGAAACG ACTGACCGCC CTGCTGTGAT CTTAGGCTTT
CCAGTTGGCT TTGTCGGAGC TATCGAATCA AAGCAAGCCC TTGCTGAGAA CTCTCGTAAT
GTTCCTTTTA TGACCCTTCA TGGTCGTCGC GGCGGCAGTG CGATCGCGGC TGCAGCAGTG
AACGCGATCG CTCAGGAGAG TGAACTATGA
 
Protein sequence
MFDYIRNGTD IYKKSFCIIR EEACLSHLPE DLATVVVRLI HACGMTDIVQ DFEASATALV 
SGRQALKDGC PILCDSQMVA NGITRKRLPA ENPVICTLNE PEVPAIAQQI NNTRSAAAME
LWRSQLQGSV VVIGNAPTAL FRLLEILDET TDRPAVILGF PVGFVGAIES KQALAENSRN
VPFMTLHGRR GGSAIAAAAV NAIAQESEL