Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1852 |
Symbol | cobH |
ID | 3774427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1920852 |
End bp | 1921481 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637800293 |
Product | precorrin-8X methylmutase |
Protein accession | YP_400869 |
Protein GI | 81300661 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2082] Precorrin isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.334862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.809538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACT ACATTCGGAA TGGCACTGAC ATCTATAAAA AGTCTTTTTG CATTATTCGT GAAGAGGCTT GTCTTAGCCA TTTGCCAGAG GACTTGGCTA CGGTTGTAGT CCGTCTCATC CACGCTTGTG GGATGACTGA CATTGTTCAA GACTTTGAAG CCTCAGCTAC AGCATTAGTT TCAGGACGTC AAGCACTCAA GGATGGATGT CCTATTCTTT GTGATTCTCA AATGGTCGCC AATGGCATTA CCCGTAAGCG ATTACCTGCT GAGAATCCAG TGATTTGTAC CTTGAATGAA CCCGAAGTGC CCGCGATCGC ACAGCAAATT AACAACACTC GCTCAGCTGC AGCAATGGAG CTATGGCGAT CGCAATTACA GGGTTCAGTT GTTGTCATTG GCAATGCACC CACCGCGCTC TTTCGCTTAC TGGAAATCCT TGATGAAACG ACTGACCGCC CTGCTGTGAT CTTAGGCTTT CCAGTTGGCT TTGTCGGAGC TATCGAATCA AAGCAAGCCC TTGCTGAGAA CTCTCGTAAT GTTCCTTTTA TGACCCTTCA TGGTCGTCGC GGCGGCAGTG CGATCGCGGC TGCAGCAGTG AACGCGATCG CTCAGGAGAG TGAACTATGA
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Protein sequence | MFDYIRNGTD IYKKSFCIIR EEACLSHLPE DLATVVVRLI HACGMTDIVQ DFEASATALV SGRQALKDGC PILCDSQMVA NGITRKRLPA ENPVICTLNE PEVPAIAQQI NNTRSAAAME LWRSQLQGSV VVIGNAPTAL FRLLEILDET TDRPAVILGF PVGFVGAIES KQALAENSRN VPFMTLHGRR GGSAIAAAAV NAIAQESEL
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