Gene Synpcc7942_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1847 
Symbol 
ID3774422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1913856 
End bp1914755 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content58% 
IMG OID637800288 
Productdihydrodipicolinate synthase 
Protein accessionYP_400864 
Protein GI81300656 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.284862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC CTTATCCCTT CGGCCGTGTG ATCACGGCCA TGATTACTCC ATTCAATGCC 
GAGGGCCAGG TGGCCTACGA CATTGCTCAG TCCTTAGCTG TCCACCTGGT TGAACAGGGC
AGTGATGGCC TTGTGATTTG TGGCACCACT GGTGAGTCAC CCACCCTCAC TTGGGAAGAA
GAACTGCAAC TGTTCCGGGC CGTGAAAGAA GCAGTGGGCG ATCGTGCCGC TGTGATTGCC
GGCACTGGCT CCAATTGCAC CCGTGAGGCG ATCGCGGCCA CCCAAAGTGC TGCAACCCTT
GGGCTAAACG GTAGCTTGCA AGTGGTGCCC TACTATAACA AGCCACCCCA GGAAGGGCTG
TATGCTCATT TTCGGGCGAT CGCTGAAGCC TGTCCCGACC TGCCCCTGAT GCTGTACAAC
ATCCCTGGGC GAACCGGTCA AAGCCTTCAA CCCGAAACGG TTGCTAGACT GGCGTCACTC
CCGAATGTGG TCGCCATCAA AGCAGCCAGT GGCAATGTTG AAGAAGTCAG CGCGCTGCGT
CAGCTGCTGC CCGATTCCTT TGCCATCTAC TCCGGTGATG ACTCGCTCAC CCTGCCGATG
CTGGCAGTCG GTGCCCAAGG CGTGGTTAGC GTTGCCAGCC ATCTGGTTGG ACCCCAGCTG
CAAGCCCTCA TCCAAGCGTT CGAAGCAGGG AATGTGGCAC GAGCGCAACA GTTGCACCAT
CAGCTCTACC CGCTGTTTAA GGCGTTGTTC CTGACCACCA ATCCCATCCC TGTGCGAGCG
GCTATGGAAT TGCTGGGCTG GTCAATCGGG CTTCCTCGTC TGCCCTTGGT GCCTGCGAGC
GCAGAAATTC GTCAAGCGCT GGCGAGTTGT TTAACGGAAC TCGGTCTTTA CACCGCTTAG
 
Protein sequence
MPQPYPFGRV ITAMITPFNA EGQVAYDIAQ SLAVHLVEQG SDGLVICGTT GESPTLTWEE 
ELQLFRAVKE AVGDRAAVIA GTGSNCTREA IAATQSAATL GLNGSLQVVP YYNKPPQEGL
YAHFRAIAEA CPDLPLMLYN IPGRTGQSLQ PETVARLASL PNVVAIKAAS GNVEEVSALR
QLLPDSFAIY SGDDSLTLPM LAVGAQGVVS VASHLVGPQL QALIQAFEAG NVARAQQLHH
QLYPLFKALF LTTNPIPVRA AMELLGWSIG LPRLPLVPAS AEIRQALASC LTELGLYTA