Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1847 |
Symbol | |
ID | 3774422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1913856 |
End bp | 1914755 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800288 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_400864 |
Protein GI | 81300656 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.284862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGC CTTATCCCTT CGGCCGTGTG ATCACGGCCA TGATTACTCC ATTCAATGCC GAGGGCCAGG TGGCCTACGA CATTGCTCAG TCCTTAGCTG TCCACCTGGT TGAACAGGGC AGTGATGGCC TTGTGATTTG TGGCACCACT GGTGAGTCAC CCACCCTCAC TTGGGAAGAA GAACTGCAAC TGTTCCGGGC CGTGAAAGAA GCAGTGGGCG ATCGTGCCGC TGTGATTGCC GGCACTGGCT CCAATTGCAC CCGTGAGGCG ATCGCGGCCA CCCAAAGTGC TGCAACCCTT GGGCTAAACG GTAGCTTGCA AGTGGTGCCC TACTATAACA AGCCACCCCA GGAAGGGCTG TATGCTCATT TTCGGGCGAT CGCTGAAGCC TGTCCCGACC TGCCCCTGAT GCTGTACAAC ATCCCTGGGC GAACCGGTCA AAGCCTTCAA CCCGAAACGG TTGCTAGACT GGCGTCACTC CCGAATGTGG TCGCCATCAA AGCAGCCAGT GGCAATGTTG AAGAAGTCAG CGCGCTGCGT CAGCTGCTGC CCGATTCCTT TGCCATCTAC TCCGGTGATG ACTCGCTCAC CCTGCCGATG CTGGCAGTCG GTGCCCAAGG CGTGGTTAGC GTTGCCAGCC ATCTGGTTGG ACCCCAGCTG CAAGCCCTCA TCCAAGCGTT CGAAGCAGGG AATGTGGCAC GAGCGCAACA GTTGCACCAT CAGCTCTACC CGCTGTTTAA GGCGTTGTTC CTGACCACCA ATCCCATCCC TGTGCGAGCG GCTATGGAAT TGCTGGGCTG GTCAATCGGG CTTCCTCGTC TGCCCTTGGT GCCTGCGAGC GCAGAAATTC GTCAAGCGCT GGCGAGTTGT TTAACGGAAC TCGGTCTTTA CACCGCTTAG
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Protein sequence | MPQPYPFGRV ITAMITPFNA EGQVAYDIAQ SLAVHLVEQG SDGLVICGTT GESPTLTWEE ELQLFRAVKE AVGDRAAVIA GTGSNCTREA IAATQSAATL GLNGSLQVVP YYNKPPQEGL YAHFRAIAEA CPDLPLMLYN IPGRTGQSLQ PETVARLASL PNVVAIKAAS GNVEEVSALR QLLPDSFAIY SGDDSLTLPM LAVGAQGVVS VASHLVGPQL QALIQAFEAG NVARAQQLHH QLYPLFKALF LTTNPIPVRA AMELLGWSIG LPRLPLVPAS AEIRQALASC LTELGLYTA
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