| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1841 |
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| Symbol | |
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| ID | 3774416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1907478 |
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| End bp | 1908845 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800282 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_400858 |
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| Protein GI | 81300650 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0966134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTT TCTTCTCGCC GTTTCAGATT CAGCTGGGTT TGGGTGCTAT CCCCCTTCAA
GTCGGAGAGG CTTGCGATCG TCCCGCCCGA TCGCTCACGA CCGATTCCCG CCAGATCCAA
CCCGGCGACA TTTTTCTGGC CTTGCGGGGC GATCGCTTTG ATGGCCATGA CTTTGTCGCT
CAAGCCCTTG CCGATGGTGC GATCGCTGCG ATCGTCGATA GGGACTATCA GCCGCCCAGT
GATTTAGCCG CGGGCCATCT CCTGCAAGTG GACAATACCC TTTGGGCTTA TCAGGAAGTG
GCGCGGCTCT GGCGACAGCG CTGTTCCTTG CCCCTGATTG GCATCACAGG ATCCGTGGGC
AAAACCACGA CAAAAGAACT GATCGCCGCG ATGCTGGCGG TGCGCGGGCC GGTGCTGAAA
ACGGAGGCCA ACTACAACAA CGAAATCGGC GTTCCCAAGA CCGTTTTGCA GATCGATCCC
GATCACCATT GGGCAGCCGT GCTGGAAATG GGAATGCGCG GCCGTGGTCA AATTGCCGAG
CTAGCCCGCA TTGCCCAGCC AAATATTGCG GTGATCACCA ACGTCGGCAC AGCCCATATC
GGTCTACTCG GATCCGAACA GGCGATCGCG GAAGCCAAGT GTGAACTGCT GGCGCAACTG
TCCGGCACAG GGCTGGCAAT TTTGAACGCT GATAACCACC GCCTGATCGC GACGGCTCAA
CGGCTGAACT TACCGCGCTG TCGCACCTAT GGCTTGCAGA ATGGCGACTT GCAGGGTCAG
CTTATTGATC TAGAAACCTT GGTTGTTGAG GGTCAGCGCT TCCGGCTGCC GTTGCCCGGG
GCTCACAACG CTCTTAACTT CCTCGCGGGT CTGGCGATCG CTCAGGAATT GGGGCTGGAC
TGGGAGGCTT TCCGCGACTT AAGCGTGACG CTGCCCCAAG GTCGGGCGCG GCGCATTGAA
CTGTCGCCGG ATATCGTCCT GCTTGATGAA ACCTACAACG CGGGCTTGGA GTCGATGTTG
GCAGCGCTGC AGCTTTTGGC GGATACGCCG GGCCAACGCC GGATTGCAGT GCTGGGCACG
ATGAAGGAAT TGGGCGATTT CAGCGAAACC TACCATCGCC AAGTTGGCGA AAAAGCGGCT
GCCCTCGGTC TCGATCGCCT CTTGATCTAT GCTGACCCGA CAGAAGCGGC TGCCATGCAA
GCGGGAGCTT CTGCGATCGC CACGCAGATC TTCACCAACG CTGAGGATTT GCTAAGCGAG
CTCCGCCAGT CTGTCCAGAC GGGCGATCGC CTGCTGTTTA AAGCCTCGCG CAGTGTCGCC
CTCGATCGCA TCCTCGCGGA CTTTGTGGCA GTCTACAGTG CTGTCTGA
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| Protein sequence | MATFFSPFQI QLGLGAIPLQ VGEACDRPAR SLTTDSRQIQ PGDIFLALRG DRFDGHDFVA
QALADGAIAA IVDRDYQPPS DLAAGHLLQV DNTLWAYQEV ARLWRQRCSL PLIGITGSVG
KTTTKELIAA MLAVRGPVLK TEANYNNEIG VPKTVLQIDP DHHWAAVLEM GMRGRGQIAE
LARIAQPNIA VITNVGTAHI GLLGSEQAIA EAKCELLAQL SGTGLAILNA DNHRLIATAQ
RLNLPRCRTY GLQNGDLQGQ LIDLETLVVE GQRFRLPLPG AHNALNFLAG LAIAQELGLD
WEAFRDLSVT LPQGRARRIE LSPDIVLLDE TYNAGLESML AALQLLADTP GQRRIAVLGT
MKELGDFSET YHRQVGEKAA ALGLDRLLIY ADPTEAAAMQ AGASAIATQI FTNAEDLLSE
LRQSVQTGDR LLFKASRSVA LDRILADFVA VYSAV
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