Gene Synpcc7942_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1831 
Symbol 
ID3774406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1899856 
End bp1901019 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID637800272 
Productinosine 5-monophosphate dehydrogenase 
Protein accessionYP_400848 
Protein GI81300640 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01304] IMP dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0836682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATCC AACTGGGGCG CGGCAAGACC GTCCGCAGAG CTTACGGCAT TGACGAAATT 
GCGCTTGTAC CGGGCGATCG CACGGTAGAC CCTGCTGTGA CCGACACCCG CTGGACGATC
GGCGGAATCG AGCGGGAAAT TCCGATTCTG GCCAGTGCCA TGGACGGCGT TGTCGACGTC
AAAATGGCGG TGCGTCTCTC ACAATTGGGA GCGATCGGGG TGATCAACCT TGAAGGCATC
CAAACGCGCT ACGAAGATCC AGAGCCGATC CTCGATCGTA TTGCCTCGGT TGGTCCAACT
GAGTTTGTGC CCTTGATGCA GGAACTCTAC GCCGTTCCAG TCCAAGAGTC TCTGATCCGC
AAGCGGATTG CCGAAGTCAA ATCCCAAGGT GGCATTGCTG CAGTCAGTGC GACACCAGCC
GGTGCTGCAA AATTTGGCCC TGTCGTTGCT GAAGCCGGTG CTGACCTCTT CTTCATTCAG
GCAACGGTCG TTTCGACTGA TCACGTTGCC CCCGAGGGGG TTGAACCGCT CGATTTGGCT
GCTTTCTGTC AGTCGATGCC CATTCCAGTG ATCTTGGGCA ACTGCGTCAC CTATGACGTT
ACCCTGAAGC TGCTGAAAGC TGGCGCCGCT GGCATTTTGG TCGGCATTGG CCCCGGTGCA
GCCTGTACTT CGCGCGGGGT TCTGGGCGTT GGGATTCCCC AAGCGACTGC TGTCTCGGAC
TGTGCAGCGG CTCGCGACGA CTACGAGCGG GAAACTGGTC GCTATGTACC GATCATTGCG
GATGGTGGCC TAATCACCGG TGGTGATATC TGCAAGTGTA TTGCTTGCGG TGCCGATGCT
GTGATGATTG GCTCTCCCTT CGCACGAGCT GCAGAAGCGC CGGGTCGTGG CTTCCACTGG
GGGATGGCGA CACCGAGCCC CGTCTTGCCG CGCGGTACCC GTATCAAGGT AGGCACCACC
GGCACGCTCG AACAAATCCT GCGCGGACCC GCACAACTGG ATGATGGCAC TCATAATTTC
CTGGGTGCCC TGAAAACCAG TATGGGAACG TTGGGCGCGC AAACCCTCAA GGAAATGCAA
CAGGTTTCTG TGGTGATTGC GCCTTCCCTG CTGACGGAAG GGAAGGTCTA CCAGAAAGCT
CAGCAACTGG GGATGGGCAA ATAA
 
Protein sequence
MDIQLGRGKT VRRAYGIDEI ALVPGDRTVD PAVTDTRWTI GGIEREIPIL ASAMDGVVDV 
KMAVRLSQLG AIGVINLEGI QTRYEDPEPI LDRIASVGPT EFVPLMQELY AVPVQESLIR
KRIAEVKSQG GIAAVSATPA GAAKFGPVVA EAGADLFFIQ ATVVSTDHVA PEGVEPLDLA
AFCQSMPIPV ILGNCVTYDV TLKLLKAGAA GILVGIGPGA ACTSRGVLGV GIPQATAVSD
CAAARDDYER ETGRYVPIIA DGGLITGGDI CKCIACGADA VMIGSPFARA AEAPGRGFHW
GMATPSPVLP RGTRIKVGTT GTLEQILRGP AQLDDGTHNF LGALKTSMGT LGAQTLKEMQ
QVSVVIAPSL LTEGKVYQKA QQLGMGK