| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1829 |
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| Symbol | |
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| ID | 3774404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1898205 |
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| End bp | 1898975 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637800270 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_400846 |
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| Protein GI | 81300638 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.314161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAA TCCCAGCCAT TGACCTCCTC GGAGGGCAGT GCGTACGCCT TTTCCAAGGG
GATTACGATC AGGCGGAAGT CTACGGCAAA GATCCCGTGG GAATGGCCTT GCGCTGGGCC
GAAGCCGGAG CCCAGCGTCT GCACTTGGTC GACCTAGATG GTGCCAAGGA GGGTTCACCT
GTCAATGCGG AGGCGATCGC AACGATCGCG CAACGGCTCT CAATTCCGGT TCAAGTGGGG
GGCGGCCTGC GCGATCGCGA CACCGTGGCT CGCCTGCTTG ACAGCGGGGT TGAACGGGCC
ATTCTCGGGA CTGTGGCGGT CGAAAGGCCA GCGCTCGTTG AAGCCTTAGC TGGGGAATTT
CCGGGTCAGA TTGCCGTGGG GATCGATGCC CGCAGCGGCA AAGTCGCCAC AAGGGGCTGG
CTGGAAGATT CTGGGCTCAC AGCCGTTGCA CTGGCACAGC AGATGGCAGA CTTGGGCGCT
TGCGCACTGA TCTGCACCGA CATTGGGCGA GATGGCACGC TTCAAGGTCC GAACCTGGAG
GAATTGCGGG CGATCGCGGC TGCAGTCTCC ATTCCGGTCA TTGCGTCGGG TGGTGTCGGA
TCGCTAACTG ATCTCCTCAG CTTGCTGCCC CTCGAGGCCC AAGGGGTGAG CGGCGTGATC
GTTGGCAAAG CTCTCTATAC CGGTGCCGTC GATCTCCAAG AGGCCCTACG GGCGATCGGT
TCAGGACGCT GGCAAGATGT GGCCGTGGAT GATTCCTCCC GCTTGGCTTA A
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| Protein sequence | MDVIPAIDLL GGQCVRLFQG DYDQAEVYGK DPVGMALRWA EAGAQRLHLV DLDGAKEGSP
VNAEAIATIA QRLSIPVQVG GGLRDRDTVA RLLDSGVERA ILGTVAVERP ALVEALAGEF
PGQIAVGIDA RSGKVATRGW LEDSGLTAVA LAQQMADLGA CALICTDIGR DGTLQGPNLE
ELRAIAAAVS IPVIASGGVG SLTDLLSLLP LEAQGVSGVI VGKALYTGAV DLQEALRAIG
SGRWQDVAVD DSSRLA
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