Gene Synpcc7942_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1806 
Symbol 
ID3774381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1875268 
End bp1875741 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID637800247 
Productbacterioferritin comigratory protein 
Protein accessionYP_400823 
Protein GI81300615 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.8819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.151514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAC AAGTGGGCGA TCGCGCGCCA GATTTTACGC TGCCAGATCA ACAAGGTAAT 
CCCGTCAGCC TGACTGACCT GCGAGGTCAG CGAGTGGTGA TCTACTTCTA CCCGAAGGAC
GACACGCCGG GCTGCACCAA GGAAGCCTGT GGCTTTCGGG ACGATTTCAG CTTGTTTGAG
CAAGCCGGGA TTGTTGTTCT GGGGGTCAGC AAAGATCCTG CCAGCAAACA CCAGAAGTTT
ATTGCGAAGT ACGAGCTGCC TTTTACATTG CTTACTGATG CGGATGCCGC TGTCGCCAGC
GCCTACGACA GCTACGGCCT CAAGAAATTC ATGGGGCGGG AGTACATGGG CATGATGCGC
CACACGTATG TAATCGATGT CGAGGGCAAG ATCGAGCAGA TTTACACCAA GGTCAAACCC
GAAACCCACG CGCGGCAAAT CTTGACTGAT TTGGGTGTCG CCGTTGCCGA GTGA
 
Protein sequence
MPLQVGDRAP DFTLPDQQGN PVSLTDLRGQ RVVIYFYPKD DTPGCTKEAC GFRDDFSLFE 
QAGIVVLGVS KDPASKHQKF IAKYELPFTL LTDADAAVAS AYDSYGLKKF MGREYMGMMR
HTYVIDVEGK IEQIYTKVKP ETHARQILTD LGVAVAE