| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1794 |
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| Symbol | |
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| ID | 3774369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1864768 |
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| End bp | 1865946 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800235 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_400811 |
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| Protein GI | 81300603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.455812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0036927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTAACT TTCGTTTGTC GCAGCGGCTC GCACCCTTAC AACGCAATGT TTTTGCCGAT
ATGGATCGGG CCAAAGCGGT AGCGATCGCA GCGGGTCGGG AGGTCATTGA CCTCTCCCTC
GGCTCCTCGG ATCTGCCTGC ACCAGATCAT GTGGTCGCTG TGATCGCGGC TAGTCTGCAA
GATCCCAGCA CCCACGGCTA TCTGCTGCAT CAGGGCACAC TCCCGTTTCG GCAGGTCGCG
GCGGCTTGGT ATGAACGCAA GTTCGGCCTC GGTGTTGATC CCGAAACGGA AGTCCTGCTG
CTAATAGGTT CTCAAGAGGG GACGGCCCAC CTACCGCTAG CGGTGATGGA GCCTGGCGAG
ATTGCTCTGC TCCAAGATCC GGGCTATCCC TCCCATGCAG GCGGAGTCTA CCTAGCGGGT
GGAGAGATCT ATCGCCTCCC GACGACGGCC GATCGCGGCT TTTTGCCAGA CTTCAGTACG
ATTCCAACTG AAATTCTGTC GCGATCGCGG CTACTCGTCC TCAGCTATCC TCACAATCCG
ACGACCGCGA TCGCACCGCT AGCCTTTTTT GAAGAGGCTG TAGCTTTCTG CCGTCACCAT
CAACTGGTGC TCGCCCACGA CTTCCCCTAT CCCGACCTCG GTTTTGATGG GGTTGAGGTA
CCCTCAATTT TCCAAGCTGA TCGCCAGAAA CAGCAGGCGA TCGAGTTCTT TTCGCTTTCC
AAGTCCTACA ACATGGGCGG CTTTCGGGTG GGCTTCGCGA TCGGCAATGC GGAGTTGATT
GGAGCCCTGC GGCGACTCAA AGCCGTGGTC GACTTCAACC AATATCAAGG CATTTTGGCC
GGCGCGATTG CTGCGCTTAC TGGCCCACAG GCTTGTGTCG AAGCGACCCG TCAACGCTTC
CGCGATCGCC GCGATATCTT CATCAATGCA CTGGCCGCTA CCGGCTGGAC GATTCCGAAG
CCAGTGTCAA CCATGTACCT CTGGGCACCG CTGCCGGAAC CGTGGCAAAC GCGATCGCTG
GAGTTTTGCG AAAAACTTGT CGCCGAAACC GGGGTCGCCG CTTCGCCGGG CATCGGCTTT
GGCGACTGCG GTGAAGGCTT TGTTCGCTTT GCCCTAGTAC ACGACCGCGA TCGCCTCGAA
GAAGCTGCCC GCAGGATCAC GCAGTTCCTC GCCCGCTAA
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| Protein sequence | MPNFRLSQRL APLQRNVFAD MDRAKAVAIA AGREVIDLSL GSSDLPAPDH VVAVIAASLQ
DPSTHGYLLH QGTLPFRQVA AAWYERKFGL GVDPETEVLL LIGSQEGTAH LPLAVMEPGE
IALLQDPGYP SHAGGVYLAG GEIYRLPTTA DRGFLPDFST IPTEILSRSR LLVLSYPHNP
TTAIAPLAFF EEAVAFCRHH QLVLAHDFPY PDLGFDGVEV PSIFQADRQK QQAIEFFSLS
KSYNMGGFRV GFAIGNAELI GALRRLKAVV DFNQYQGILA GAIAALTGPQ ACVEATRQRF
RDRRDIFINA LAATGWTIPK PVSTMYLWAP LPEPWQTRSL EFCEKLVAET GVAASPGIGF
GDCGEGFVRF ALVHDRDRLE EAARRITQFL AR
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