Gene Synpcc7942_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1792 
Symbol 
ID3774367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1863290 
End bp1864270 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content57% 
IMG OID637800233 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_400809 
Protein GI81300601 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00323607 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCCCCA CGCATCGTCC CCGTCGCCTG CGATCGTCCG AAACTCTGCG CCGGATGGTG 
CGCGAAACGA CGTTGACTTC GGCCGACTTC ATCTATCCCT TGTTTGCGGT GCCCGGTGAG
GGCGTCGCCA AGGAAGTAAC CTCGATGCCT GGCGTCTATC AACTGTCGAT CGACAAGATC
GTGGAAGAGG CCAAGGAGGT CTATGACCTT GGCATTCCCT CGATCATTCT GTTTGGCATT
CCCACCGACA AAGACAACGA TGCAACCGGC GCTTGGCACG ACTGCGGCAT CGTTCAGAAG
GCCGCAACCG CTGTCAAAGA AGCAGTGCCT GAGCTGATTG TTGCCGCTGA CACCTGCCTG
TGCGAGTACA CGCCCCATGG CCACTGCGGC TATCTGGAAG TAGGTGATCT CTCCGGTCGC
GTCCTCAATG ATCCGACTTT GGAATTGCTG CGCAAAACAG CGGTGTCTCA GGCCAAAGCA
GGAGCTGACA TCATTGCCCC TTCCGGCATG ATGGACGGTT TTGTCGCCAC GATTCGCGAT
GCCTTGGATG AAGCGGGCTT TAGCGATACG CCGATCATGG CCTACTCGGC TAAGTATGCG
TCGGCTTACT ACGGTCCTTT CCGCGATGCG GCGGAATCAA CTCCACAATT TGGCGATCGC
CGCACCTATC AAATGGATCC GGGCAACAGC CGCGAAGCGC TCAAGGAAGT CGAACTTGAC
GTGGCCGAGG GTGCTGACAT CGTCATGGTC AAACCAGCCC TCTCCTACAT GGACATTATC
TGCCGGATCA AAGAAACCAC TGACTTGCCG GTCGCCGCTT ACAACGTTTC TGGCGAGTAT
TCGATGGTCA AAGCGGCAGC ACTCAATGGC TGGATCGATG AAGAGCGGGT TGTACTAGAA
ACCCTGACTA GCTTCAAGCG GGCTGGGGCT GATCTAATCC TGACCTACCA CGCCAAGGAT
GCAGCTCGCT GGCTCGCCTA G
 
Protein sequence
MFPTHRPRRL RSSETLRRMV RETTLTSADF IYPLFAVPGE GVAKEVTSMP GVYQLSIDKI 
VEEAKEVYDL GIPSIILFGI PTDKDNDATG AWHDCGIVQK AATAVKEAVP ELIVAADTCL
CEYTPHGHCG YLEVGDLSGR VLNDPTLELL RKTAVSQAKA GADIIAPSGM MDGFVATIRD
ALDEAGFSDT PIMAYSAKYA SAYYGPFRDA AESTPQFGDR RTYQMDPGNS REALKEVELD
VAEGADIVMV KPALSYMDII CRIKETTDLP VAAYNVSGEY SMVKAAALNG WIDEERVVLE
TLTSFKRAGA DLILTYHAKD AARWLA