Gene Synpcc7942_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1790 
Symbol 
ID3774365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1861019 
End bp1861810 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID637800231 
ProductDNA adenine methylase 
Protein accessionYP_400807 
Protein GI81300599 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.557139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0298379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC CTGCGATCGC GCCGTTGAAG CCACCGCTGA AATGGGCTGG GGGTAAACGC 
TGGCTGGCAC CCAAACTGCA AGAACTCGTT CAAGGCATCA CCTACGATCG CCTCGTTGAG
CCATTTTGTG GCGGGCTGGC TGTCACGCTC AGCTTGCAGC CCAAACGGGC GCTTTTGAAT
GACATTAATC CGCATTTGAT CAACTTCTAC CAGCAGGTCA AAGCAGGATT AGAGATCACA
ATTCCCCTCG AAAACGATTC AGATCTCTAC TATCAATATC GGCAAGCTTT TAATCAGACT
GAGCTACCTT CAGCCCTATC AGCCCAATAT TTTTACTATC TCAATCGCAC GGGTTTTAAT
GGCCTCTGCC GCTTCAACTC CAAGGGTGAA TTTAATGTCC CCTTTGGTCG CTATAAAACG
ATTCATTACC GCTACGACTT TTCAGATTAC TCCCAACTTT TTCAGGATTA TCAGTTCTAT
CTCGGTGACT TTGATCAGTT AGTAGTCGGC AAGCAAGATC TGATCTATGC TGACCCCCCC
TACGATGTCG AATTTCGGCA ATACGCTAAA GAGGGATTTA CTTGGGATGA TCAAGTTCGA
CTTGCCCAGT GGCTAGCTTC AGCAACCGGT CCGGTGATTA CTTCTAATCA AGCAACGCCC
AGAGTTTTAG AGCTTTACCA AGCCCTAGGA TTTCAAGTCA TGACCTGTTT AGCGCCTCGC
AGGATTGCCT GTAATGGCGA TCGCAGCCCA GCCCTAGAAA TGATTGCCAT GAAAGGGATG
AGTCAAGCCT AG
 
Protein sequence
MPDPAIAPLK PPLKWAGGKR WLAPKLQELV QGITYDRLVE PFCGGLAVTL SLQPKRALLN 
DINPHLINFY QQVKAGLEIT IPLENDSDLY YQYRQAFNQT ELPSALSAQY FYYLNRTGFN
GLCRFNSKGE FNVPFGRYKT IHYRYDFSDY SQLFQDYQFY LGDFDQLVVG KQDLIYADPP
YDVEFRQYAK EGFTWDDQVR LAQWLASATG PVITSNQATP RVLELYQALG FQVMTCLAPR
RIACNGDRSP ALEMIAMKGM SQA