Gene Synpcc7942_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1785 
Symbol 
ID3774360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1853308 
End bp1853718 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content62% 
IMG OID637800226 
Producthypothetical protein 
Protein accessionYP_400802 
Protein GI81300594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0273251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.172836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCTC AGGGGTGGCC GCTGACGCAG CTCCCAGGGC TGAGCAATGG CGATCGCCAA 
CAACTGGCAG CGCACGGCAT TCACTTCAGC CTGGACTTAC TCAAGCTGCG ATCGGAAGCG
GCGCAACTGG ACTTAGCTCA GCAGCTGCGA CAGCCCGTCC AGCGGGTGCG CAAATGGCAA
GCTTTGGCAC AGCTTTCGCA TCTGCCCTCG GTCAACCATC GTTGGTGTGG CGTGCTGCTG
CACACGGGCA TCAGTAGCCC GCAAATGCTG GCGCTTCAGA GTCCGCCCCA ATTGCATCAA
CGCCTGCATC GTCTCCAGCG ATCGCTATTG GGCGATCGCA GTCCAGCCCC GACCCTTGGG
CAAGTCGATC GCTGGATTCG CGAAGCCCAA CAGTTTTTGC AACGGCGCTA G
 
Protein sequence
MPAQGWPLTQ LPGLSNGDRQ QLAAHGIHFS LDLLKLRSEA AQLDLAQQLR QPVQRVRKWQ 
ALAQLSHLPS VNHRWCGVLL HTGISSPQML ALQSPPQLHQ RLHRLQRSLL GDRSPAPTLG
QVDRWIREAQ QFLQRR