| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1784 |
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| Symbol | |
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| ID | 3774359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1852529 |
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| End bp | 1853311 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637800225 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_400801 |
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| Protein GI | 81300593 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0903247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.197076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAACC AAGCAGCGTT ACGAACCCGA GGGATGGAAT TGCTGGTCGC CTACGCTGAG
ACTCCCAGCA TTGCCCTCCG CAACCAGATT GTTCAGCTCA ATCTAGGGCT GGTCCGCAAA
ATTGCCCACC GATTAAGCCG GCAATGCTCT GAACCCTATG AAGATCTGGA ACAGATTGGT
TTCATGGGAT TAATTCGAGC GATCGAGCGA TTTCAGCCTC ATCAAGGGTG TGCATTTAGT
TCCTTTGCAG TGCCCTATAT ACGCGGCGAA ATTCTTCATT TTTTACGCGA CAGTTGTCAT
AGCATTCGGA TTCCGCGCCG CTGGCAAGAA CTGCAGCGTC AAGGACAGCA ATTGCGGGAG
GTCCTGCGCC ATGAATGGGG ACGAGCCCCA ACGGAACAAG AGCTGGCTTT TGCTCTCAAT
CTGTCAATGA CGGAATGGCA AGAAATTCAC CTCGCTCGCC GTAATCGGAT GCCGATGAGT
CTGGATGCCA CGCTCAGTCA AGCCGGTGAT TCTTCCGTCA CCTTGGTGGA AACCCTGCCC
GATACCAGCC AGCAGTGGCA GCAGGCCGCC CTTGAAGAGC GTCAACAGCT GGTGGAAGCG
ATCGGCCAAC TGGAAGAAAA AGCCAGAACA GCGATCGAAT CTGTTTACCT GCGCGGGCTA
ACCCGCAAAG AAGCGGCCCA GCAATTTGGT ATCAGTCCGA TGACGATTAC CCGCCGGATC
AATCGCGGGG TTCAAAAAAT CGCCGAGCAC CTCGACCGCA TGGCAAACGA GCCCTTAGCC
TAG
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| Protein sequence | MVNQAALRTR GMELLVAYAE TPSIALRNQI VQLNLGLVRK IAHRLSRQCS EPYEDLEQIG
FMGLIRAIER FQPHQGCAFS SFAVPYIRGE ILHFLRDSCH SIRIPRRWQE LQRQGQQLRE
VLRHEWGRAP TEQELAFALN LSMTEWQEIH LARRNRMPMS LDATLSQAGD SSVTLVETLP
DTSQQWQQAA LEERQQLVEA IGQLEEKART AIESVYLRGL TRKEAAQQFG ISPMTITRRI
NRGVQKIAEH LDRMANEPLA
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