Gene Synpcc7942_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1781 
Symbol 
ID3774356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1847468 
End bp1847743 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content54% 
IMG OID637800222 
Producthypothetical protein 
Protein accessionYP_400798 
Protein GI81300590 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.473501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA CTGTTCTGAT CCCCACCCCC CTGCAAAAAT TCACCAACAA CCAAGCCAGC 
TTGGAATGTG AAGCAAGCGA TGTGAAATCC TTGCTAGAGG CGCTGGAACA ATCCTTCCCG
GGGATTAAAG CGCGTCTGTG CGATGAGCAG GGCCAGTTGC GCCGCTTTTT GAACGTCTAC
GTCAACAGCG AAGATATTCG CTTCCTCGAT GGCATTCAAA CCAGCTTGGG CAACGGTGAC
GAAGTCAGCA TTGTGCCGGC AGTCGCTGGC GGCTGA
 
Protein sequence
MAITVLIPTP LQKFTNNQAS LECEASDVKS LLEALEQSFP GIKARLCDEQ GQLRRFLNVY 
VNSEDIRFLD GIQTSLGNGD EVSIVPAVAG G