Gene Synpcc7942_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1772 
SymbolrpsP 
ID3774347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1838756 
End bp1839004 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content57% 
IMG OID637800213 
Product30S ribosomal protein S16 
Protein accessionYP_400789 
Protein GI81300581 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TGCGTCTCAA GCGCTTCGGT AAGAAACGGG AAGTCAGCTA CCGTATCGTG 
GCGACCAACA GCACCTCGCG CCGCGATGGC CTGCCCCTAG AAGAGTTGGG ATTCTACAAC
CCCCGCACCA ACGAAACCCG TCTGGATGTG CCGGCGATCG TCCGTCGTCT CCAACAAGGC
GCTCAACCGA CGGAAACCGT GCGCAGCATT CTGCGTAAAG CCCAAATCTT TGAACAGCTC
AAGGCCTAG
 
Protein sequence
MIKLRLKRFG KKREVSYRIV ATNSTSRRDG LPLEELGFYN PRTNETRLDV PAIVRRLQQG 
AQPTETVRSI LRKAQIFEQL KA