| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1771 |
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| Symbol | |
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| ID | 3774346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1837162 |
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| End bp | 1838652 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800212 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_400788 |
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| Protein GI | 81300580 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAGT TACTGCCACG CGATCGCTCA TTCATGTTTG ACGCTCTTGC CGAACGCCTA
GAACAGGCCT GGACAAAGCT CCGGGGCCAG GACAAAATCA GCGAGTCGAA TGTCCAAGAG
GCGCTCAAAG AAGTTCGGCG CGCCCTGCTC GAGGCAGATG TCAACCTCGG CGTCGTCAAG
GAATTTATCG CCCAAGTCCA GGAAAAAGCA GTCGGGACGC AGGTGATCAG CGGGATTCGT
CCCGATCAGC AATTCATCAA GGTCGTCTAC GACGAGCTGG TGCAGGTCAT GGGGGAAACC
CATGTACCCC TAGCGCAAGC GGCCAAGGCA CCGACCGTCA TTTTGATGGC CGGTCTCCAG
GGTGCCGGTA AAACTACGGC GACGGCAAAA CTGGCGCTGC ATCTGCGTAA AGAAGGGCGA
TCGACCCTGT TGGTTGCCAC GGACGTCTAC CGTCCCGCCG CGATCGACCA GTTGATCACG
TTAGGCAAAC AGATCGACGT GCCCGTGTTC GAGCTGGGTA GCGACGCCAA TCCAGTTGAG
ATTGCCCGCC AAGGTGTCGA GAAAGCCCGG CAGGAAGGCA TTGACACCGT CATCGTCGAC
ACGGCGGGTC GCCTCCAAAT CGACACCGAA ATGATGGAGG AGCTCGCCCA AGTTAAAGAG
GCGATCGCTC CCCACGAAGT CTTGCTGGTT GTCGACTCGA TGATCGGCCA AGAGGCCGCC
AGTCTGACTC GTAGCTTCCA TGAGCGGATT GGCATCACCG GCGCAATCCT GACGAAACTA
GATGGCGACA GCCGTGGCGG GGCAGCACTT TCGATTCGGC GCGTTTCTGG GCAGCCGATC
AAGTTTGTAG GTCTGGGCGA GAAAGTCGAG GCTCTCCAGC CCTTCCATCC CGAGCGGATG
GCCTCGCGCA TCCTCGGCAT GGGCGATGTG CTGACCTTGG TCGAAAAGGC GCAAGAAGAA
ATCGACTTGG CTGACGTCGA AAAAATGCAG GAGAAAATCC TGGCGGCCAA ATTTGACTTC
ACCGACTTTC TCAAGCAGAT GCGCCTGCTC AAGAACATGG GCTCGCTGGC TGGGTTCATC
AAACTGATTC CGGGTCTGGG CGGCAAGATC AACGACGAGC AGCTACGCCA AGGCGAACGC
CAGCTCAAAC GGGTCGAGGC GATGATCAAC TCCATGACGC CGCAGGAGCG TCGTGACCCC
GACTTGCTTT CCAATTCCCC TAGCCGCCGT CACCGCATCG CCAAAGGCTG CGGGCAAACG
GAAGCCGAAA TCCGCCAAAT CATTCAGCAA TTCCAACAGA TGCGCACAAT GATGCAGCAG
ATGAGCCAAG GTGGCTTCCC CGGCATGGGC GGCATGGGAA TGCCCGGTTT TGGCGGTGGC
ATGCCTGGAT TCGGTGGCGG GGCCCCGGCT CCTCAACCCG GTTTCCGGGG GTACGGCCCT
CCGAAAAAAC AAAAGAAAGG CAGCAAGAAG AAAAAAGGCT TTGGCTTGTA A
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| Protein sequence | MGKLLPRDRS FMFDALAERL EQAWTKLRGQ DKISESNVQE ALKEVRRALL EADVNLGVVK
EFIAQVQEKA VGTQVISGIR PDQQFIKVVY DELVQVMGET HVPLAQAAKA PTVILMAGLQ
GAGKTTATAK LALHLRKEGR STLLVATDVY RPAAIDQLIT LGKQIDVPVF ELGSDANPVE
IARQGVEKAR QEGIDTVIVD TAGRLQIDTE MMEELAQVKE AIAPHEVLLV VDSMIGQEAA
SLTRSFHERI GITGAILTKL DGDSRGGAAL SIRRVSGQPI KFVGLGEKVE ALQPFHPERM
ASRILGMGDV LTLVEKAQEE IDLADVEKMQ EKILAAKFDF TDFLKQMRLL KNMGSLAGFI
KLIPGLGGKI NDEQLRQGER QLKRVEAMIN SMTPQERRDP DLLSNSPSRR HRIAKGCGQT
EAEIRQIIQQ FQQMRTMMQQ MSQGGFPGMG GMGMPGFGGG MPGFGGGAPA PQPGFRGYGP
PKKQKKGSKK KKGFGL
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