Gene Synpcc7942_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1748 
Symbol 
ID3775448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1818990 
End bp1819751 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content60% 
IMG OID637800187 
Producthypothetical protein 
Protein accessionYP_400765 
Protein GI81300557 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.707104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTCT CTGATCATTT CTCAGCGGTC GCAGCCAGCT ATGCCAAGGC TCGGCCTCGC 
TATCCGCAGC GTTGGTTCCG CTACTTGGCG CGCATAGTAC CCGATCGCCA GCGGGTTTGG
GATTGCGCCA CGGGCAATGG TCAAGCGGCG ATCGCCCTTG CGGAATACTT CAGCGAAGTG
ATTGGCAGCG ATGCCAGTGC TGCTCAAGTT CGACAGGCCC GATCGCATCC GCGCGTTCAG
TATCAAGTCT TTCCGGCGGA AGCGACCCCT TTAGCACCTG CCAGTCTGGA TTTAATCACC
GTTGCTCAAG CGGCTCATTG GTTTGATCTG CCGCAGTTTT ACATCGAGGC GCAACGGCTG
CTACGCCCGG GCGGGGTGAT TGCCCTCTGG GGCTACGGTC TAGGCAGCCT CAATCCGGCG
ATCGATCACG TCTTCAATCA CTTTTATCGC GACTGGCTGG ATCCCTATTG GCCCCCAGAA
CGGCAATGGG TGGAGCAAGC CTACGAGGGG CTCTCCTTCC CCTTTGAGCC GCTGCCGACG
CCGACCTTTT CGATGCAGTG CGATTGGACC CTGTTCGATT TGTTGGCCTA TCTGCGGACT
TGGTCTGGGG TGCAGCAATT TCAACGGCAG CGCGGCTTCG ATCCGGTCTG GGCGATCGCG
CCAGAACTGC AACGGGTTTG GGGCGATCCC CAGCGCTATC GCCGCATCAC TTGGCCCCTG
TTTGCCAAGG TGGGTCGCTG GCAGCCCGAT CGCGTTCGTT AG
 
Protein sequence
MSFSDHFSAV AASYAKARPR YPQRWFRYLA RIVPDRQRVW DCATGNGQAA IALAEYFSEV 
IGSDASAAQV RQARSHPRVQ YQVFPAEATP LAPASLDLIT VAQAAHWFDL PQFYIEAQRL
LRPGGVIALW GYGLGSLNPA IDHVFNHFYR DWLDPYWPPE RQWVEQAYEG LSFPFEPLPT
PTFSMQCDWT LFDLLAYLRT WSGVQQFQRQ RGFDPVWAIA PELQRVWGDP QRYRRITWPL
FAKVGRWQPD RVR