| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1748 |
|---|
| Symbol | |
|---|
| ID | 3775448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1818990 |
|---|
| End bp | 1819751 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800187 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400765 |
|---|
| Protein GI | 81300557 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.707104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTTTCT CTGATCATTT CTCAGCGGTC GCAGCCAGCT ATGCCAAGGC TCGGCCTCGC
TATCCGCAGC GTTGGTTCCG CTACTTGGCG CGCATAGTAC CCGATCGCCA GCGGGTTTGG
GATTGCGCCA CGGGCAATGG TCAAGCGGCG ATCGCCCTTG CGGAATACTT CAGCGAAGTG
ATTGGCAGCG ATGCCAGTGC TGCTCAAGTT CGACAGGCCC GATCGCATCC GCGCGTTCAG
TATCAAGTCT TTCCGGCGGA AGCGACCCCT TTAGCACCTG CCAGTCTGGA TTTAATCACC
GTTGCTCAAG CGGCTCATTG GTTTGATCTG CCGCAGTTTT ACATCGAGGC GCAACGGCTG
CTACGCCCGG GCGGGGTGAT TGCCCTCTGG GGCTACGGTC TAGGCAGCCT CAATCCGGCG
ATCGATCACG TCTTCAATCA CTTTTATCGC GACTGGCTGG ATCCCTATTG GCCCCCAGAA
CGGCAATGGG TGGAGCAAGC CTACGAGGGG CTCTCCTTCC CCTTTGAGCC GCTGCCGACG
CCGACCTTTT CGATGCAGTG CGATTGGACC CTGTTCGATT TGTTGGCCTA TCTGCGGACT
TGGTCTGGGG TGCAGCAATT TCAACGGCAG CGCGGCTTCG ATCCGGTCTG GGCGATCGCG
CCAGAACTGC AACGGGTTTG GGGCGATCCC CAGCGCTATC GCCGCATCAC TTGGCCCCTG
TTTGCCAAGG TGGGTCGCTG GCAGCCCGAT CGCGTTCGTT AG
|
|---|
| Protein sequence | MSFSDHFSAV AASYAKARPR YPQRWFRYLA RIVPDRQRVW DCATGNGQAA IALAEYFSEV
IGSDASAAQV RQARSHPRVQ YQVFPAEATP LAPASLDLIT VAQAAHWFDL PQFYIEAQRL
LRPGGVIALW GYGLGSLNPA IDHVFNHFYR DWLDPYWPPE RQWVEQAYEG LSFPFEPLPT
PTFSMQCDWT LFDLLAYLRT WSGVQQFQRQ RGFDPVWAIA PELQRVWGDP QRYRRITWPL
FAKVGRWQPD RVR
|
|---|
| |