Gene Synpcc7942_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1747 
Symbol 
ID3775447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1817778 
End bp1818962 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID637800186 
Producthypothetical protein 
Protein accessionYP_400764 
Protein GI81300556 
COG category[R] General function prediction only 
COG ID[COG1453] Predicted oxidoreductases of the aldo/keto reductase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.482758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACC GACGCTTTGG CCGAACCGAG CTTGCCATGC CCGTGTTTTC CTGTGGGGGC 
ATGCGCTACC AGCAGTCTTG GAAAGATGTG GACTGGCCGG AGATCTCGGT TGAGAGTCAA
GCCAACCTAG AAGCGACTCT GGCGCGATCG CTAGAGTTGG GCATCAATCA TATTGAGACA
GCCCGCTATT ACGGCAGCTC AGAACGGCAG CTCGGTAAAG CCCTAGCCGC CTATCCGCGA
TCGGAGATTA TTCTGCAAAC GAAGGTCCCC CCCAGCGAAG ATCCGGCGGA ATTTCTAGAG
ACCTTCGATC GCAGCATGAG CTTGCTGCAG ACTGATTACG TCGACCTGCT GAGCATTCAC
GGCGTCAATA ACGCAGAACT GCTGGATTGG GCGCTGCGCA AGGGCGGCTC TTTAGATGTG
GCGGAACGAC TGCAAGCAGA AGGACGGGTT CGCCACATCG GCTTTTCGAC CCATGCACCG
CTGCCAGTGA TCCTAGAGGC AATCGCTAGC GATCGCCTTA GTTATATCAA TCTGCACTGG
TACTACATCT TCCAGACCAA TCAAGCCGCG CTAGAAGCTG CCCAAAAACA CGACATGGGT
GTGTTCATCA TCAGCCCCTC TGATAAGGGC GGACACCTCT ACTCACCGCC GCAAAAACTG
GTCGATCTCT GCGAGCCACT GCACCCCATG GTCTTCAATG ACCTCTTTTG CCTCAGCCAG
CCCCAAATCC ATACCCTCAG CATTGGTGCG GCGCGGCCCA GTGATTTTGA TCGCCACTTG
GAAACCTTGC CCTTGCTTGA CCAAGCGGAT CAGGTATTGC CGCCAATCTT GGAGCGCCTC
GAAGCAGCTG CCACTGCTGC ACTGGGGCAA GACTGGCTGG ACACCTGGAT GGTTGGCTTG
CCCACCCCTG ACACCACCCC GGGGGAAATT AATATCCCGA CGATTGTCTG GCTTTACAAT
CTTGTGCAAG CTTTCGACAT GGTCAAATAC GCCAAAGCTC GCTACAACTT GCTTGGTAAT
GGTGGCCACT GGTTTCCGGG GCAAAGGGCA GGACAGTTTG ATCCAGTTGC ACTCTCCGCA
GCCCTCGATC AAAGCCCTCA TCGCGATCGC ATTCTCCAAA TTCTCAAGGA AATGGATGCT
TGGTTGGGGG GTGAGTCTGT CGTTCGACTC TCCCAAAGCA GCTGA
 
Protein sequence
MRYRRFGRTE LAMPVFSCGG MRYQQSWKDV DWPEISVESQ ANLEATLARS LELGINHIET 
ARYYGSSERQ LGKALAAYPR SEIILQTKVP PSEDPAEFLE TFDRSMSLLQ TDYVDLLSIH
GVNNAELLDW ALRKGGSLDV AERLQAEGRV RHIGFSTHAP LPVILEAIAS DRLSYINLHW
YYIFQTNQAA LEAAQKHDMG VFIISPSDKG GHLYSPPQKL VDLCEPLHPM VFNDLFCLSQ
PQIHTLSIGA ARPSDFDRHL ETLPLLDQAD QVLPPILERL EAAATAALGQ DWLDTWMVGL
PTPDTTPGEI NIPTIVWLYN LVQAFDMVKY AKARYNLLGN GGHWFPGQRA GQFDPVALSA
ALDQSPHRDR ILQILKEMDA WLGGESVVRL SQSS