Gene Synpcc7942_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1739 
Symbol 
ID3775439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1809717 
End bp1810142 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content50% 
IMG OID637800178 
ProductMerR family transcriptional regulator 
Protein accessionYP_400756 
Protein GI81300548 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.784519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCTA CACTGCTCAA AATTGGTGAA ATTGCCAAAC AAGTCGGTGT CGCCGTTGGC 
ACGATTCGCT ATTACGAAAC TCTGCAACTG ATTCAACCCA GCACGCGGGG TGAAAATGGC
TATCGCTATT ACAAGCCCCA AACCATTCAG CAGCTGCAAT TTATTCGTCA GGCACAGACT
TTAGGATTTT CGCTGGAGGA AATTCGGCAG ATTTTAACGG TCTATGCCGA AGGCACGCCT
CCCTGCAGCC TCGTGCAGAC ATTGCTCAAT CAAAAGATCG CCACCCTAGA AGAGAAGCTC
CAGCAGATTC AGACCTTTAA GGCGCAGCTC GAATCCTATC GCGATCGCTG GCAGCAGACG
CCCACCCCTC AAACGGTAAC GAAGTCAGAA ATCTGTCCGT TAATTGCAAC CATTCCCCAA
ACTTGA
 
Protein sequence
MTATLLKIGE IAKQVGVAVG TIRYYETLQL IQPSTRGENG YRYYKPQTIQ QLQFIRQAQT 
LGFSLEEIRQ ILTVYAEGTP PCSLVQTLLN QKIATLEEKL QQIQTFKAQL ESYRDRWQQT
PTPQTVTKSE ICPLIATIPQ T