Gene Synpcc7942_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1735 
Symbol 
ID3775435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1804805 
End bp1806244 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content56% 
IMG OID637800174 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_400752 
Protein GI81300544 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CGGTGCAAGC GCTGGTTAAC CAGCCCTACA AATACGGCTT CGTCACGGAT 
ATTGAGACCG AAAAAATTGC GAAAGGTCTC AGTGAAGAGG TCGTGCGTCT GATTTCTGCC
AAGAAAGAAG AGCCGGAGTG GATGCTGGAG TTTCGGCTCA AGGCCTATCG TCGTTGGTTG
ACGATGGAGG AGCCCGATTG GGCGGCGGTG GGCTACCCCG CGATCGATTA CCAAAACATC
GTCTACTACG CAGCTCCCAA GCAAAAAGCT GAGAAGAAGC AGAGCTTGGA CGAAGTTGAC
CCAACGCTGC TGGAAACCTT TGAGAAGCTG GGGATTCCCC TTAGTGAACA GAAGCGGCTG
GCGAATGTGG CCGTCGACGC CGTGTTCGAC AGCGTTTCGA TCGCAACCAC CTTCCGCGAA
AAGCTCGCCG AAGAAGGCGT GATCTTCTGC TCAATCTCCG AAGCCGTGCG GGAATATCCC
GAGATGGTGA AGCAGTACCT CGGCAGTGTG GTGCCGATCG GCGATAACTA CTTCGCGGCG
CTCAACTCGG CGGTCTTTAG CGACGGCTCC TTTGTCTTCA TTCCCAAGGG CGTGCGCTGC
CCGATGGAAC TGTCGACCTA CTTCCGAATC AACAGTGGCG ATACCGGTCA GTTTGAGCGG
ACGCTGATCG TTGCCGAGGA AGGCAGCCAT GTCAGCTACT TGGAAGGCTG CACCGCACCG
ATGTTCGACA CCAACCAACT GCATGCGGCG GTGGTAGAAC TGGTGGCCTT GGATGATGCC
GAGATCAAAT ACTCGACCGT CCAGAACTGG TACGCCGGCG ATGAGAATGG CAAAGGTGGC
ATCTACAACT TCGTGACCAA GCGCGGCCTC TGTAAGGGTC GCAACTCCAA GATCTCTTGG
ACGCAGGTGG AAACCGGTTC GGCGATTACT TGGAAGTACC CAAGCTGCGT GCTGGTGGGT
GACAACAGTG TCGGTGAGTT CTACTCAGTA GCGCTGACCA ACAACTGCCA GCAAGCTGAC
ACCGGCACCA AGATGGTGCA CATCGGCAAA AACACCCGCA GCACGATCGT TAGCAAAGGC
ATTTCCGCTG GGCGATCGCA GAATAGCTAC CGCGGCTTGG TCAAAGTGGG GCCACAGGCG
ACGGGGGCGC GCAACTACAG CCAGTGCGAC TCGATGTTGA TTGGCGATCG CGCCGCAGCC
AACACCTTCC CCTATATCCA AGTCCAGAAT GCTGGCGCTC AAGTTGAGCA CGAAGCCTCG
ACCAGCAAGA TTGGTGAAGA CCAGCTCTTC TACTTCCAGC AACGCGGCAT CTCCCTCGAA
GACGCAGTGT CAATGTTGAT CAGCGGCTTC TGCAAGGACG TTTTCAACCA GCTACCGATG
GAATTTGCCG TCGAAGCCGA TCGCTTGCTC AGCCTCAAAC TGGAAGGCTC CGTCGGCTAA
 
Protein sequence
MSATVQALVN QPYKYGFVTD IETEKIAKGL SEEVVRLISA KKEEPEWMLE FRLKAYRRWL 
TMEEPDWAAV GYPAIDYQNI VYYAAPKQKA EKKQSLDEVD PTLLETFEKL GIPLSEQKRL
ANVAVDAVFD SVSIATTFRE KLAEEGVIFC SISEAVREYP EMVKQYLGSV VPIGDNYFAA
LNSAVFSDGS FVFIPKGVRC PMELSTYFRI NSGDTGQFER TLIVAEEGSH VSYLEGCTAP
MFDTNQLHAA VVELVALDDA EIKYSTVQNW YAGDENGKGG IYNFVTKRGL CKGRNSKISW
TQVETGSAIT WKYPSCVLVG DNSVGEFYSV ALTNNCQQAD TGTKMVHIGK NTRSTIVSKG
ISAGRSQNSY RGLVKVGPQA TGARNYSQCD SMLIGDRAAA NTFPYIQVQN AGAQVEHEAS
TSKIGEDQLF YFQQRGISLE DAVSMLISGF CKDVFNQLPM EFAVEADRLL SLKLEGSVG