Gene Synpcc7942_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1731 
Symbol 
ID3775431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1802686 
End bp1803171 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID637800170 
Producthypothetical protein 
Protein accessionYP_400748 
Protein GI81300540 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTG TTTTACAGGT CAATTGGCTG GCCTATCAAG CCCTGATCGA GAAAGTTGCG 
ATCGCGATTG ACCAATCAGG CTGGAGGCCG CAGCAAGTGT TAGCGATCGC ACGAGGTGGG
CTCTATCTCG GCGATGCACT CTCGCGCATT CTGCAAGTGC CGCTGGCCGT GATGGCCGTG
CAGTCCTATG GCGGTGAGGC GGGACGCGAT CGTGGGGCTG TCCAGATTGG TGCCAACATC
GCCATGACCA GCGATCGCCT CTTGAGTCCG CTACTGCTGG TTGATGACCT GGTGGATTCT
GGCGAAACCC TGCAGCAGGC GATCGCTTGG TTGCAACAAA CCCAAGACGT GACGGAGCTG
CGAACGGCTG TCCTGTGGCA GAAACCTAGT AGTTCGTTTC AGCCAGATTT TGCTGCCCAA
GTCCTGACTG ATAATCCTTG GATTGAGCAA CCATTCGAAC TCTACGATCG CTGGAATCGC
CGATAA
 
Protein sequence
MTAVLQVNWL AYQALIEKVA IAIDQSGWRP QQVLAIARGG LYLGDALSRI LQVPLAVMAV 
QSYGGEAGRD RGAVQIGANI AMTSDRLLSP LLLVDDLVDS GETLQQAIAW LQQTQDVTEL
RTAVLWQKPS SSFQPDFAAQ VLTDNPWIEQ PFELYDRWNR R