Gene Synpcc7942_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1730 
Symbol 
ID3775430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1802050 
End bp1802640 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content58% 
IMG OID637800169 
Producthypothetical protein 
Protein accessionYP_400747 
Protein GI81300539 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAA AAACAGCTTC GACCATGCTG GCCTTAGGCA CTGCGGCGCC TGATTTTGCT 
CTGCCGGATG TGGTATCGGG CCGAACTGTT CAGTTAGCAG ATTTCAGCGA TCGCGCCGGC
CTCTTGGTGA TGTTCATCTG CCAGCACTGT CCGTTTGTCA AACACGTCGA GGAAGAACTG
GCTGCGATTG GACGGGATTA CCTCGACTTG GGCATTGTGG CGATCAGCCC CAACAGCTTG
GAAACCCATC CCCAAGATGG CCCGGAGCAG CTCAAAGCCC AGGCTGAGCG ACTCGGCTTT
ACCTTCCCCT ACTGTCTGGA CGAAACCCAA GCGATCGCCA AAGCCTACAC CGCCGCTTGC
ACCCCCGATT TCTTCCTGTT CGATCGCGAT CGCCGCTTGG TCTATCGGGG TCAACTCGAT
GACAGTCGCC CCAGTAGCGA TCGCCCAGTG ACGGGGGCCG ACCTGCGAGC CGCGATTACG
GCAGTCCTCA CAGGAGACGC TCCCAGCGCT GACCAAAAAC CTAGCATTGG CTGCAACATC
AAGTGGCATC CGGGCCAAGA GCCGGATTAC TACGGCGCTC AACTGGTCTA A
 
Protein sequence
MMAKTASTML ALGTAAPDFA LPDVVSGRTV QLADFSDRAG LLVMFICQHC PFVKHVEEEL 
AAIGRDYLDL GIVAISPNSL ETHPQDGPEQ LKAQAERLGF TFPYCLDETQ AIAKAYTAAC
TPDFFLFDRD RRLVYRGQLD DSRPSSDRPV TGADLRAAIT AVLTGDAPSA DQKPSIGCNI
KWHPGQEPDY YGAQLV