| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1722 |
|---|
| Symbol | |
|---|
| ID | 3775422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1794143 |
|---|
| End bp | 1795228 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637800161 |
|---|
| Product | thiosulphate-binding protein |
|---|
| Protein accession | YP_400739 |
|---|
| Protein GI | 81300531 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCC GTTCCTTCCT CCCGCTTCGG CCCGGTATCA AGCGATCGCT TGCAGGTGGT
TTGGCCGCCG CAATTGCAGC AGGTAGCTTT GCGACTACGG CTGGGGCGCG CAGTGCCCAA
ACCAGTGCCG CAGGGGCTAC TCCTCAGCAA GTTGCTCAAG CCAAGCAGGA GCTGGTTCTT
GTGTCCTATG CAGTCACCAA GGCTGCCTAC GATCGCATCA TTCCCAAGTT CACGGCCAAG
TGGAAAAAAG AAAAAGGGCA AGACGTCACC ATTCGCGGTA GTTACGGTGG GTCTGGCTCC
CAAACTCGGG CCATCCTCGA TGGCTTGGAA GCTGACATCG CGGCTTTGGC CCTGGAATCA
GACACGGCTC GCCTAGAACG AGCGGGGCTG ATTGGCAAAA ACTGGCAAAG ACGACTGCCT
AATAACTCCA ACCTCTCCAG TTCGGTGGTA GTTATTTGTA CTCGTAAAGG GAATCCCAAA
AAGATCAAAG GCTGGGCTGA CTTAGCGAAA CCTGGGGTTC GGATCGTGAC AGCCAACCCC
AAAACCTCTG GTGGGGCTCG CTGGAACTTC CTCGCGCTCT ACGGTTCTGT CGCTAAGAAT
GGGGGCACCG ATAAACAAGC CTTTGACTTT GTGAAGAAAG TCTATGACAA CGTCCCTGTC
TTGGCTAAGG ACGCTCGGGA ATCCACTGAT ATCTTCTACA AGAAGAATCA GGGCGATGTG
CTCCTGAACT ACGAGAATGA AGTGATTCTG GCGCGCCTCA ATGGCGAAGA TGTGGGAACC
TGCATCACGC CGCAGGTCAA CATTGCGATC GAAACGCCGA TCGCGGTGGT CGATAAGGTC
GCCAACAAAC GAAAGACTAA GGCGATCGCT GATGCCTTTA CTCGCTTTGT CTTTACCCCT
GAGGCGCAAG AGGAGCTCGC TAAGGTTGGT TTCCGGCCGG CTAATGCCGC TGTCGCTCAA
AAATATCGCA AGAATTTCCC CCCTCTGACC AAGCTCTACA ACATCAAGAG CTTTGGTGGC
TGGGCTGCTG CTGACAAGAA GTTCTTTGCT GATGGCGGCG TCTTCGACCA AATCCAAGGT
CGTTAA
|
|---|
| Protein sequence | MAFRSFLPLR PGIKRSLAGG LAAAIAAGSF ATTAGARSAQ TSAAGATPQQ VAQAKQELVL
VSYAVTKAAY DRIIPKFTAK WKKEKGQDVT IRGSYGGSGS QTRAILDGLE ADIAALALES
DTARLERAGL IGKNWQRRLP NNSNLSSSVV VICTRKGNPK KIKGWADLAK PGVRIVTANP
KTSGGARWNF LALYGSVAKN GGTDKQAFDF VKKVYDNVPV LAKDARESTD IFYKKNQGDV
LLNYENEVIL ARLNGEDVGT CITPQVNIAI ETPIAVVDKV ANKRKTKAIA DAFTRFVFTP
EAQEELAKVG FRPANAAVAQ KYRKNFPPLT KLYNIKSFGG WAAADKKFFA DGGVFDQIQG
R
|
|---|
| |