| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1716 |
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| Symbol | |
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| ID | 3775415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1783939 |
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| End bp | 1787655 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637800154 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_400733 |
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| Protein GI | 81300525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA TAAGACCACG ATTTTCTCTT TGGCAACACC CTCAGCGCGC TCTGATTATT
GCAGTTCTTT ATGGCGCAGC AGGACTGCTT TGGATCCTCT CTACAGATTC CTTACTGCAA
ACTTGGCTTC GTACCGAGGT TAGTGTTTGG CAGTGGTCAA CACTTAAGGA AATTTTCTAC
TTTTTTCTGT CAGCAGTAGT TCTCTACGTC CTGCTCCGTC AGTGGCAGAT TCTCCAAACC
CTCCGCCACG CGAATCAGGA ACAACGATTA CAGCAACTGC TGCATCTTTT GGATGGCAAT
CCCTGGCCCT TATGGCTGGT GGAACCCCAA ACTCTGCGCA TCCTCGATCG CAATGCCGCC
GCTACCGCTT GGGGAAATGT TGCCTATCTT CAGGAACTCG CCCCGCGCTC GCAACTGCTC
AAGCAATGGG CTGAGAACCC AGATGCGCTG CGCCTGAGTC TCGATCTCAA GATTCCGAAT
GGGCAACTGC GTTCGGTTGA GCTACAGCGC TGCGCTTACC CTGATCCAGG GGCTTGGTTG
ATTGCCGCCA GGGACTGTGG TGATCTCCAG AGCTGGCAGC AACTGACCCA AGTGGGTTAC
TGGGAACTCG ACGTCCAATC CCAACTGGTT CAGACTTCGC CGCTGGTCAA CCGGCTACTG
GGGAAACCCT CCGATCAGTG CCTCTTCTCT TGGCAGCAGT GGCTGGAGCA CTTTCAACTT
AGCGATCGTT TGCGATTGGA GCAAGCGATC GACACGGGAA TGCAGACGGG GCGACCCATT
CAAGCAACCT ATGCCCTCGC GAGTGATTCT CAAGATCGTC AGTTAGTCGA GTTGCGAGCC
GTCATCGTCA GGGATCTGGC CGGTAACGTG CGATCGCTGC GGGGGGTCCT TGAACCAAAG
CATCAAGCAC CACTCACTTC CCTTGAACCC TTGCCCTTAT CGCTTGATCA TCCGGCTGTC
CTCCGTCGCA TCTTGGAGGC GATTCCTGAC CCGATTTACA TCAAAGACTA TAGGGGCGAA
ATCCTGCTGC AAAATCGAGC CTGTCTTGAT TTACAACCCT TCGTAATGCC GGAGGTTATT
AAACAAGAAG ATATTAATGA CTTGGCTACG ATCGCCTCCG GTTTGCCAAT CATTAATGAA
GAGTGGACGA TCAACCCTGA AAATTGGCCG AGCCAGCATT TTCTGATTAG TAAAGTACCG
CTCCGTAATG AGCTTGGGCA AATTCTGGGG CTGTTGGGCA TTCGCCGCAA TGTCACCCGT
TGGCGTCGAG CTGAGCAAGC CCGTAACGCG CTTTCAGATC AGCTAGAGCA GACCCTCGCA
GCTGTCAGTG ATGGTGTTGT TGTTTTAGAT CAAAACTTTG TTGTCCGAGC GCTCAACTCT
CAAGCAGCCC AACAACTGAA GAAAACGTCT GAACAGATCA TTGGTCGAGT TTTTTGGGAT
TTATTTCCAG TAGAGCTAGG TGCCACCCTT CAGTCCGAGC TCCAACCACT GCAGCATCAG
TCTTCGACAA GAACCTTTGA ACTCTGGATT GACCCACTGT CAACCTGTTG GGAGGTAAAT
GTCCATCGTT CTACAGCTGA AATATCGCTC TATTTTCGTG ACATTAGCGA TCGCGTGATG
AGCCGTCAAC TGCTAGAAGA AATGGCGGAG CGTTTTCAAC TTGTCACTCG TGCGACGAAT
GATGCGGTTT GGGATCGCAA TCTACTCACT AATGAGATCT GGTATAGCGC TAACTACAGC
CGCCTATTTG GGGGAGAAGA AAAAGAGATC ACTCAAAAGC TTGTGCAGAC TGTCGATTTG
CAATGGCGCG ATCGCCTCGA TCCCGATCAA CGCGAGCGAA TCATGGCCAG CTTGTCCGGT
GCGATCGCTA ACGGTTTCAG CACATGGAGT GAGCAATATC GTTTTCTGCG GCAAGATGGC
ACCTATGCCC ATGTCCTCGA TCGTGGCTAC ATTGTTCGGG ATGAGAATGG CCGGGCGATT
CGGGCAGTTG GTGCCATGCA GGATATCTCT GCGATCGTGG CTGCCAATGA GCAATTGCGG
TTGTGGCTAA GAGCTATTGA ATCCACCGGA AATAGCATCA TTATTGCGGA TGCTCAACAA
CCGGATATGC CAATTATTTA TGTCAATCCC GCCTTTGAAA AAATCACAGG CTTTAGTGCT
GCTGAAGTGA TAGGTCGCAA CTTTCGATTT CTCCAAGGGC TCGAAACTCA GCAAGCTGAA
CTCGAAGAGA TGCGCCGAGC CTTGGAGGAA GGGACGTACT GTGAGGTAAC GCTACGCAGT
TACCGTAAGG ACGGCTCACT TTTTTGGAAT CAGATTTCTC TTGCGCCCGT TCGAGATCAG
AAAGGGCACC TAACCCACAT GGTGGCCTCA CAAACTGATG TCAGCGAGAG TAAAGCGTTC
GAAGAAATGC TACTGCAACA GGCAACCCAC GATGCTCTCA CTGGTCTGCC TAATCGCCTG
CTCTTTTTAG ATCGCCTCGA TCAAGCCGCT GCCCGTGCCC GTGGCGGTGG ATCGCCGATC
GCAGTACTCT TCATCGATCT CGATAATTTC AAAGCGATCA ACGATGGCTT TAGCCACAGC
GAAGGAGATG CCGTTCTGCA AATTGCTGCT GGACGATTGC AACAATGTAT TCAAGAGCAT
GAAACGGTTG CCCGCCTCAG TAGTGATGAG TTTGTCATTC TCTTAATTGA TCTGGACGTT
CAGAGCAAAG CCCGAGTGAA GGCAGCCATG ATTCAATCCC TGATGGCCAA GCCCTTCGAA
GTGATGGGTA ATCCGATTGA ACTGACAGCG AGTATTGGGG TTGCGACCTT CCCCCACGAT
GGTCAATCGG GCAGTGAGTT GTTGCAGGCC GCTGATTTAG CAGTCTGTGC TGCCAAGCAA
CAGGGCAAAA ATCTTTGGTG TTCGTTCTCA GAAGCGATGC GCGAACAGTT GCGCAGTCGG
ATCGACATTG AGAAAGACTT ACGCCAAGCC TTGATTGATA ACTCTCTAGA GCTCTATTTC
CAGCCTCAAG TTGATTTGGT TACCCATCGG CTCTTGGGTT TTGAAACTTT AGTCCGCTGG
AATCACCCCG AGCGCGGCTT AGTGGCTCCG GGTGAATTTA TTCCGATTGC TGAAGAATCT
GACCTCATTG ATGCAATTGG ATTGTGGGTG ATGCGAGCGG CGGGTTTGAC GCTCCGTCGT
TGGATTGACC ACGAAGGGTT TACAGGTAGC CTGTCTTTCA ATATTTCAGC CAGACAATTC
ATCCGCCAAA ATATTTTCTT GAAACTGTTT GATGTCCTCC AAGAGTTTCA GATTCCGCCG
CACCAATTGG AAATCGAGCT GACAGAAAGT AGCCTGATCG AATCGCCGGA ACGATTTGTG
CAATGGCTCC AGGAAGCCCG ATCGATGGGA TTTCAAGTCG CTTTAGATGA TTTTGGGACG
GGTTATTCCA GCCTTGGTTA CCTCAAGCGT TTGCCCATCA ATGCTCTCAA AATTGATCGC
AGCTTTATTC GCGATCTGCC GCACGACCAT GACGATCAAG CGATCGTGCA GGCGATTGTT
GCAATGGCCA AGGTCTTGAA ACTTCGCACG ATCGCAGAAG GCGTAGAACG CCTCGAGCAA
GCCGCCTTCT TAGAAGCGAT TGGTTGTGAT GCTGTGCAAG GGTTCTTCTA TGGCCCACCA
CTGCCCGAAG CAGAAGCGCT TGCCTTCCTG CACCGTTCCG CTTCCCCTGG GGTCTGA
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| Protein sequence | MRWIRPRFSL WQHPQRALII AVLYGAAGLL WILSTDSLLQ TWLRTEVSVW QWSTLKEIFY
FFLSAVVLYV LLRQWQILQT LRHANQEQRL QQLLHLLDGN PWPLWLVEPQ TLRILDRNAA
ATAWGNVAYL QELAPRSQLL KQWAENPDAL RLSLDLKIPN GQLRSVELQR CAYPDPGAWL
IAARDCGDLQ SWQQLTQVGY WELDVQSQLV QTSPLVNRLL GKPSDQCLFS WQQWLEHFQL
SDRLRLEQAI DTGMQTGRPI QATYALASDS QDRQLVELRA VIVRDLAGNV RSLRGVLEPK
HQAPLTSLEP LPLSLDHPAV LRRILEAIPD PIYIKDYRGE ILLQNRACLD LQPFVMPEVI
KQEDINDLAT IASGLPIINE EWTINPENWP SQHFLISKVP LRNELGQILG LLGIRRNVTR
WRRAEQARNA LSDQLEQTLA AVSDGVVVLD QNFVVRALNS QAAQQLKKTS EQIIGRVFWD
LFPVELGATL QSELQPLQHQ SSTRTFELWI DPLSTCWEVN VHRSTAEISL YFRDISDRVM
SRQLLEEMAE RFQLVTRATN DAVWDRNLLT NEIWYSANYS RLFGGEEKEI TQKLVQTVDL
QWRDRLDPDQ RERIMASLSG AIANGFSTWS EQYRFLRQDG TYAHVLDRGY IVRDENGRAI
RAVGAMQDIS AIVAANEQLR LWLRAIESTG NSIIIADAQQ PDMPIIYVNP AFEKITGFSA
AEVIGRNFRF LQGLETQQAE LEEMRRALEE GTYCEVTLRS YRKDGSLFWN QISLAPVRDQ
KGHLTHMVAS QTDVSESKAF EEMLLQQATH DALTGLPNRL LFLDRLDQAA ARARGGGSPI
AVLFIDLDNF KAINDGFSHS EGDAVLQIAA GRLQQCIQEH ETVARLSSDE FVILLIDLDV
QSKARVKAAM IQSLMAKPFE VMGNPIELTA SIGVATFPHD GQSGSELLQA ADLAVCAAKQ
QGKNLWCSFS EAMREQLRSR IDIEKDLRQA LIDNSLELYF QPQVDLVTHR LLGFETLVRW
NHPERGLVAP GEFIPIAEES DLIDAIGLWV MRAAGLTLRR WIDHEGFTGS LSFNISARQF
IRQNIFLKLF DVLQEFQIPP HQLEIELTES SLIESPERFV QWLQEARSMG FQVALDDFGT
GYSSLGYLKR LPINALKIDR SFIRDLPHDH DDQAIVQAIV AMAKVLKLRT IAEGVERLEQ
AAFLEAIGCD AVQGFFYGPP LPEAEALAFL HRSASPGV
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