Gene Synpcc7942_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1698 
Symbol 
ID3775397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1765087 
End bp1765428 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content56% 
IMG OID637800136 
Productputative transcriptional regulator 
Protein accessionYP_400715 
Protein GI81300507 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.171254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAG AATCCGGCTA TTTAGAAAGT CATGATCACA GCAATTGCCC TGCCGAAGTA 
GCGCTGCGGG TGATGCAAGG TCGCTGGAAG TTGCTGATTA TTCGGGAGCT AGCGGAGGGG
GTGCGTCGCT TTTCTGATCT GCAGCGATCG CTCGTTGGGG TTAGCCAAAA AGTCTTGACT
AGCCAGCTCC GTGAACTTGA AGCGGATGGA GTGCTGGATC GCACGGTCTA TCCAGAAGTA
CCACCCCGCG TTGAATACGC CTTGACCGAG CGTGGACAAG CCCTGCTGCC AGTGTTGGAG
GGGCTGCATG CCTGGGGGCA AGGCTTACAA TCCCCGTCTT AG
 
Protein sequence
MDSESGYLES HDHSNCPAEV ALRVMQGRWK LLIIRELAEG VRRFSDLQRS LVGVSQKVLT 
SQLRELEADG VLDRTVYPEV PPRVEYALTE RGQALLPVLE GLHAWGQGLQ SPS