Gene Synpcc7942_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1697 
Symbol 
ID3775396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1764611 
End bp1764892 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content53% 
IMG OID637800135 
ProductZn-finger, CDGSH type 
Protein accessionYP_400714 
Protein GI81300506 
COG category[S] Function unknown 
COG ID[COG3369] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.214083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAA CCATGTCGAT GCTTAGTCCT CATTCTATCC ACTTAGAAGC AGGCACCCAT 
GCTCTCTGTG CCTGTGGTCT GAGCAAATCC GGTAATTTCT GTGATGGCTC GCACCAAGGC
TCTGGTAAAG TTCCCCAGAT TCTCAAGCTG GAACAGCCTA AAACTGTCTA CCTCTGTAAC
TGTAGTGCCA GTGGCAACCA GCCCTTTTGC GACGGCAGCC ATACTCGCAG CGTGAGTCCA
GTGGCGACCA CTCGCAAGCC TTGGTGGAAG TTCTGGGGCT AG
 
Protein sequence
MDETMSMLSP HSIHLEAGTH ALCACGLSKS GNFCDGSHQG SGKVPQILKL EQPKTVYLCN 
CSASGNQPFC DGSHTRSVSP VATTRKPWWK FWG