Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1689 |
Symbol | |
ID | 3775388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1755915 |
End bp | 1756877 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800127 |
Product | rhodanese-like protein |
Protein accession | YP_400706 |
Protein GI | 81300498 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.120717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGC GATCGCTCCG CTGGCCGCGC CAAAAGGCGT TCCTAGCGGT GATTTCTCTT GTTGTTGCCG TCCTTTTGGC TGTCCCGGGC TGGCTGACAC CAGCGACCGC TGCCTCCCAG GCAACCGTGC AATTTGTGGC GCCGACTTGG GCTGCAGAAC GGCTGAATAA TAAACAGCTA AAAATTCTTG ATGTCCGCAC CAACCCCCTG GCCTACATCG AGGGCCACCT CCCCGGGGCA GTCAATATTG CCGATGCCGC CTATCGGGGA CCGAATGGCT TCTTGCCGGT GCAGATTTGG GATCCCGAAA AACTGGCGTC GCTCTTTGGT CGAGCTGGGG TCAGCAACAA CGACACTGTT TTGGTTTACT CCGACGGCAA TGATGTCCTC GGTGCAACCT TGGTGGCCTA TCTGCTCGAG CGATCGGGGG TGCAGAACAT CGCTGTGCTC GATGGGGGCT ACAAGGGCTA CAAGGATGCA GGTCTACCGG TGACCAAAGA GTATCCGCGT TACCAAGCAG CGCGGTTTGC GCCCAAGGAC AATCGTGCAT TTCGGGTTGA TATCAAGCAG GTTGAACAGT TGACGGGTAA ATCCACGTTT GTTGACCCGC GCCCGCCGGC GCTGTTTAGC GGGGAGCAAC AGGTATTTAT TCGCAACGGC CACATTCCGG GGGCCCGCAA CATTCCTTGG CCGACCTTCA CCGAAGCGAA CAACGCCAAT GAGAGTCTGA AAAATCCGCA CAAACTGAAG CCCCTCTCAG AGCTGAAAGC AATTCTGGAA GCCAAAGGGG TGACACCGGA TAAAGATGTG ATCGTTACCT GCAGCACGGG TCGCGAGGCT AGCTTGCAGT ACCTCGTGCT CAAGCACCTG CTCAAGTATC CGAAGGTGCG GATCTACGAA GGGTCTTGGA CCGAATACAG CGCTAGCAAT CTGCCGGTTG AAACTGGTCC CGATCGCGTT TAA
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Protein sequence | MSVRSLRWPR QKAFLAVISL VVAVLLAVPG WLTPATAASQ ATVQFVAPTW AAERLNNKQL KILDVRTNPL AYIEGHLPGA VNIADAAYRG PNGFLPVQIW DPEKLASLFG RAGVSNNDTV LVYSDGNDVL GATLVAYLLE RSGVQNIAVL DGGYKGYKDA GLPVTKEYPR YQAARFAPKD NRAFRVDIKQ VEQLTGKSTF VDPRPPALFS GEQQVFIRNG HIPGARNIPW PTFTEANNAN ESLKNPHKLK PLSELKAILE AKGVTPDKDV IVTCSTGREA SLQYLVLKHL LKYPKVRIYE GSWTEYSASN LPVETGPDRV
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