Gene Synpcc7942_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1689 
Symbol 
ID3775388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1755915 
End bp1756877 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content57% 
IMG OID637800127 
Productrhodanese-like protein 
Protein accessionYP_400706 
Protein GI81300498 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.120717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC GATCGCTCCG CTGGCCGCGC CAAAAGGCGT TCCTAGCGGT GATTTCTCTT 
GTTGTTGCCG TCCTTTTGGC TGTCCCGGGC TGGCTGACAC CAGCGACCGC TGCCTCCCAG
GCAACCGTGC AATTTGTGGC GCCGACTTGG GCTGCAGAAC GGCTGAATAA TAAACAGCTA
AAAATTCTTG ATGTCCGCAC CAACCCCCTG GCCTACATCG AGGGCCACCT CCCCGGGGCA
GTCAATATTG CCGATGCCGC CTATCGGGGA CCGAATGGCT TCTTGCCGGT GCAGATTTGG
GATCCCGAAA AACTGGCGTC GCTCTTTGGT CGAGCTGGGG TCAGCAACAA CGACACTGTT
TTGGTTTACT CCGACGGCAA TGATGTCCTC GGTGCAACCT TGGTGGCCTA TCTGCTCGAG
CGATCGGGGG TGCAGAACAT CGCTGTGCTC GATGGGGGCT ACAAGGGCTA CAAGGATGCA
GGTCTACCGG TGACCAAAGA GTATCCGCGT TACCAAGCAG CGCGGTTTGC GCCCAAGGAC
AATCGTGCAT TTCGGGTTGA TATCAAGCAG GTTGAACAGT TGACGGGTAA ATCCACGTTT
GTTGACCCGC GCCCGCCGGC GCTGTTTAGC GGGGAGCAAC AGGTATTTAT TCGCAACGGC
CACATTCCGG GGGCCCGCAA CATTCCTTGG CCGACCTTCA CCGAAGCGAA CAACGCCAAT
GAGAGTCTGA AAAATCCGCA CAAACTGAAG CCCCTCTCAG AGCTGAAAGC AATTCTGGAA
GCCAAAGGGG TGACACCGGA TAAAGATGTG ATCGTTACCT GCAGCACGGG TCGCGAGGCT
AGCTTGCAGT ACCTCGTGCT CAAGCACCTG CTCAAGTATC CGAAGGTGCG GATCTACGAA
GGGTCTTGGA CCGAATACAG CGCTAGCAAT CTGCCGGTTG AAACTGGTCC CGATCGCGTT
TAA
 
Protein sequence
MSVRSLRWPR QKAFLAVISL VVAVLLAVPG WLTPATAASQ ATVQFVAPTW AAERLNNKQL 
KILDVRTNPL AYIEGHLPGA VNIADAAYRG PNGFLPVQIW DPEKLASLFG RAGVSNNDTV
LVYSDGNDVL GATLVAYLLE RSGVQNIAVL DGGYKGYKDA GLPVTKEYPR YQAARFAPKD
NRAFRVDIKQ VEQLTGKSTF VDPRPPALFS GEQQVFIRNG HIPGARNIPW PTFTEANNAN
ESLKNPHKLK PLSELKAILE AKGVTPDKDV IVTCSTGREA SLQYLVLKHL LKYPKVRIYE
GSWTEYSASN LPVETGPDRV