Gene Synpcc7942_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1688 
Symbol 
ID3775387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1754913 
End bp1755773 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID637800126 
ProductSulfate ABC transporter, permease protein CysW 
Protein accessionYP_400705 
Protein GI81300497 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0527637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCT CTGTCTTCGT GCGATCGCCC GCTGTCTCAG CCCGCCCTTG GCAGGCCTAC 
CTGTTGATTG GCATAGGGCT GGCGTTTCTG ACGGCGATTG TCCTGCTGCC CTTAGTCGTC
GTGTTCTGGG AAGCGCTACG TGAAGGGTTG GCAGCCTACT GGCAAGGCAT TCAGCAACCC
GAAGCCCTCC ATGCTATTCG CTTGACGCTG CTGATTACCG CAGTCGCAAT TCCGCTGAAT
ACCTTATTTG GCGTAGCGAT CGCTTGGGTC TTGGTGCGGC AATCCTTTCC AGGTCAGGCG
ATCGTTCTGG CTTTGTTGGA TCTACCGCTC TCCATTTCGC CAGTGGTTGC CGGCTTCATG
CTGATTTTGC TCTACAGCCC CCAAATTGGC TGGCTAGCCG ATTTGGTCAA CCGCTGGGAT
TTGAAGATTG TCTTCGCCAC GCCAGGGCTG GTCTTGACGG TGATGTTCGT GACGATTCCC
TTCGTCGCCC GCGAAGTATT TCCTGTTTTG CAAACTCTCA GTCGGGAGGA TGAAGAAGCC
GCCCAGAGTT TGGGAGCCAC GACCTGGCAG ACCTTCTGGC GGGTGACCCT GCCTATGATT
CGACCGGCTT TGCTCTACGG CATCATCCTC AGCACCGCGC GGGCAATCGG GGAGTTTGGT
GCCGTCTCCG TAGTTTCGGG CAAGATTATC GGCTCGACCA ATACCCTGAC GCTGCACGTC
GAGCGGGTCT ATCTGGAGTA CCAAGCGACG GCTGCCTTTG CCTGCGCTTC TCTCTTGGCG
ATCGTGGCGC TGCTGACCCT GGTACTCCAG TACTGGATTC AGCAACAGCC CAGCAGCGCT
GCCAAGAACC GCCAACACTG A
 
Protein sequence
MAPSVFVRSP AVSARPWQAY LLIGIGLAFL TAIVLLPLVV VFWEALREGL AAYWQGIQQP 
EALHAIRLTL LITAVAIPLN TLFGVAIAWV LVRQSFPGQA IVLALLDLPL SISPVVAGFM
LILLYSPQIG WLADLVNRWD LKIVFATPGL VLTVMFVTIP FVAREVFPVL QTLSREDEEA
AQSLGATTWQ TFWRVTLPMI RPALLYGIIL STARAIGEFG AVSVVSGKII GSTNTLTLHV
ERVYLEYQAT AAFACASLLA IVALLTLVLQ YWIQQQPSSA AKNRQH