Gene Synpcc7942_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1687 
Symbol 
ID3775386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1754047 
End bp1754913 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID637800125 
ProductSulfate ABC transporter, permease protein CysT 
Protein accessionYP_400704 
Protein GI81300496 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.126404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAT TAAGCCGTTG GGAAACCTGG GGCAGTCGGA GTTTGCGGCT GGCGATCGCA 
CTCTACGCAT TCGGAGTGGT GGGGTTTCCC CTGCTGGCCT TACTTCGGGC TGCTTGGCTG
CAACCCGCTG AGAACCTCCG CAATTTACTC ACCCAAGAAC TCGCGATCGC GGCTTTTCAG
CTTTCCTTAA CCGCAGCTTT TGGGGCAGCG ATTTTTAACA CCATTCTCGG CCTGCTCTTG
GCTTGGATTT TGGTGCGCTA TCAGTTCCCA GGCAAGCGGC TGGCAGATGC CCTGATCGAT
CTCCCCTTTG CCCTGTCCGG GGTGGTTGCT GGCATCGCCC TGTTTAGCCT TTACGGCCCT
AACGGTACAA TCGCCCAATT CTGGCAGCCC GGAACCTTCT TGGGTCAACT GCTGACCCGC
TTCGGCATTG AAGACTTCAA CTTCACGGCC TCTCAACTCG GCGTGATCTT CGCCATGGTC
TACGTGACGC TGCCCTTTGT GGTGCGGACG GTGCAGCCCG TCTTAGCGGA GTTAGAGCCC
GAGATCGAGG AAGTAGCAGC GACCCTCGGG GCCACCCCTA GCCAGACCTT CTGGCGCGTG
CTGTTTCCGC AACTGATTCC CGCTTTGGTA ACCGGCTTTA GCTTGGCGCT GGCGCGGGGG
TTGGGGGAGT ACGGCTTGGT CACGATCATT TCCGGCAACC TGCCCTACAA AACCTTGGTC
GCCACGGTCT ACGTCTATCA GCGCTTTGAA GAGTTTGATA TCAGCGGGGC AACAGCTGTG
TCATTGGTGC TGTTGATTGT GTCGCTCTTG CTCCTCGCCG TCACCAACAG CCTGGGGCTC
TGGTTCCGTT TCTCCCACAA GTACTGA
 
Protein sequence
MAKLSRWETW GSRSLRLAIA LYAFGVVGFP LLALLRAAWL QPAENLRNLL TQELAIAAFQ 
LSLTAAFGAA IFNTILGLLL AWILVRYQFP GKRLADALID LPFALSGVVA GIALFSLYGP
NGTIAQFWQP GTFLGQLLTR FGIEDFNFTA SQLGVIFAMV YVTLPFVVRT VQPVLAELEP
EIEEVAATLG ATPSQTFWRV LFPQLIPALV TGFSLALARG LGEYGLVTII SGNLPYKTLV
ATVYVYQRFE EFDISGATAV SLVLLIVSLL LLAVTNSLGL WFRFSHKY