Gene Synpcc7942_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1685 
Symbol 
ID3775384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1752002 
End bp1752862 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content53% 
IMG OID637800123 
Productsulphate transport system permease protein 2 
Protein accessionYP_400702 
Protein GI81300494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.480393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.253775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCTT TCGTCAAAGC CCGTCGCCAA ATTGCGGGGG TCAAGGAGTC GAAATCTCTC 
CTGCCCTTGG CCTTAATTGG CATCTCTCTG CTCTATGTCG GTTTGATCAT CATCATTCCG
GCAGCCAATG TGGCAGTTCA AGCCTTTAGT GAAGGGCTGA GCGGTTTCAT CAAGAACTTG
GGCGATCGCA ACCTGCAAGA GGCGATTCGA CTCACTCTGT TAATGGGCGT GATCAGTGTT
CCGCTCAACA CCTTGTTTGG CCTAGCAGCT GCTTTTGCGA TCGCTCGCAA ACAGTTTCCG
GGCAAATCAC TGCTGTTGAG CGTGATTGAC CTGCCATTTT CGATCTCACC GGTCGTTGCT
GGTCTGATGA TTGTCTTGCT TTACGGCCGC AACGGTTGGT TGGGGCCCCT GCTGGAAAGC
AACGATATCA AGATTATTTT TGCTTGGCCC GGCATGGCCC TTGCCACCAT TTTTGTCTCC
ATGCCCTTTG TGGCGCGGGA AGTCATTCCT AACCTCGAAG AAATTGGCAC GGATGCTGAA
GAGGCCGCCA GTACCCTTGG GGCTAACGGC TGGCAGACCT TTTGGCGGGT CACTCTACCG
AGCATTAAGT GGAGCATGCT CTACGGCGTG GTCTTGACCA CTGCCCGAGC CCTGGGTGAG
TTTGGCGCTG TTTCGGTGGT CTCTGGCAGT ATCACCGGCA AAACCCAAAC CCTACCGCTG
TTTGTTGAAG AAGCCTACAA GCAGTATCAA ACGACTCTCT CCTATACAGC AGCATTACTG
TTGGGAGGAA TTTCCCTCGT CACCTTGGTC TTAAAGGCCC TTTTAGAAGC GCGAACAGGC
CGACAAAGTC GAATTCACTA A
 
Protein sequence
MVAFVKARRQ IAGVKESKSL LPLALIGISL LYVGLIIIIP AANVAVQAFS EGLSGFIKNL 
GDRNLQEAIR LTLLMGVISV PLNTLFGLAA AFAIARKQFP GKSLLLSVID LPFSISPVVA
GLMIVLLYGR NGWLGPLLES NDIKIIFAWP GMALATIFVS MPFVAREVIP NLEEIGTDAE
EAASTLGANG WQTFWRVTLP SIKWSMLYGV VLTTARALGE FGAVSVVSGS ITGKTQTLPL
FVEEAYKQYQ TTLSYTAALL LGGISLVTLV LKALLEARTG RQSRIH