Gene Synpcc7942_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1682 
Symbol 
ID3775381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1750203 
End bp1751039 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content58% 
IMG OID637800120 
Productsulphate transport system permease protein 2 
Protein accessionYP_400699 
Protein GI81300491 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.085038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.253775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGC GCCTCCCTTC CCTCTCCTTC ACTTGGCTGA CTCGCTTGAG TTGGTCTTGG 
CGATTCACGT GGGTGTATCT CACCCTAATC CTGTTCATCC CGATCATCGC CTTGTTCCTC
AAGTCGGCTT CCTTGCCGCT GGGAAGGATT TGGGAGTTGG CCACACAGCC GGTTGCCGTA
GCGGCCTACG AGGTGACCTT TGGTCTCTCC TTGGCGGCAG CAGCGCTCAA CGGTGTGTTT
GGCGTAATTA TTGCCTGGGT CCTGACCCGT TACGACTTCC CGGGCAAAAA GCTATTTGAT
AGCTTCATCG ATCTCCCCTT TGCCCTGCCG ACAGCAGTGG CAGGTCTGAC CCTAGCCACG
GTCTATAGCG ACAAGGGCTG GATTGGGCAG TTCATTGCAC CCTTTGGCGT TCAAATTGCC
TTCACCCGCT GGGGGGTGTT GCTGGCGATG GTGTTCATCT CTCTGCCCTT TGTGGTGCGG
ACGGTCGAGC CACTGCTGTT GGAACTGGAG GTGGAAGCAG AAGAAGCGGC CGCTTCCCTG
GGGGCTAGCC CCAGTGAAAC CTTTTGGCGC GTCATCTTAC CGCCGATTCT CCCCGGGGTG
CTGGCCGGCG TTGCCCAGGG TTTCTCGCGA GCCGTTGGCG AGTTTGGTTC GGTGGTGATC
ATCTCGGGTA ACTTGCCCTT CGATGACTTG ATTGCGCCGG TTCTGATTTT CGAACGACTG
GAACAGTACG ACTACGCGGG CGCCACCGTG ATTGGCTCCG TCTTGCTGCT GTTTTCACTG
GTGATTCTGT TCGTGATCAA CGCGCTCCAG AACTGGAGCA GCCGTTACAA CGGCTAA
 
Protein sequence
MSLRLPSLSF TWLTRLSWSW RFTWVYLTLI LFIPIIALFL KSASLPLGRI WELATQPVAV 
AAYEVTFGLS LAAAALNGVF GVIIAWVLTR YDFPGKKLFD SFIDLPFALP TAVAGLTLAT
VYSDKGWIGQ FIAPFGVQIA FTRWGVLLAM VFISLPFVVR TVEPLLLELE VEAEEAAASL
GASPSETFWR VILPPILPGV LAGVAQGFSR AVGEFGSVVI ISGNLPFDDL IAPVLIFERL
EQYDYAGATV IGSVLLLFSL VILFVINALQ NWSSRYNG