Gene Synpcc7942_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1681 
Symbol 
ID3775380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1749076 
End bp1750128 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content54% 
IMG OID637800119 
Productthiosulphate-binding protein 
Protein accessionYP_400698 
Protein GI81300490 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0235432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.49797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTG CCTGGACTCG CCGCTCCTTT CTCCAATCTG CTGCTTTGGC CACAGCCACT 
GTGATCACGA TCGCAGCTTG CGGCGGTAAC AATCAATCTT CTTCCGGTGG TAGCGGTCAA
CCCGTTGAAG TCACGCTGGT TTCCTACGCA GTCACCCAAG CGGCCTACGA GCAGATCATT
CCCAAATTTG CCGCTCAGTG GAAAGAAAAG ACCGGCCAAG AGGTGCGGTT TAACCAAAGC
TATGGCGGTT CAGGCTCGCA AACCCGCGCG GTTATTGATG GCCTCGAAGC TGATGTTGTC
GCGCTTGCCT TAGAATCCGA CATCAACCAA ATCGAGAAAG CTGGCCTAAT TCAGCCTGGC
TGGCAACAAC GGGTTCCCAA TAACGGCATC ATCACCAATT CAGTTGTGGC TTTGGTGACC
CAAGAAGGCA ATCCCAAGGG CATCAAAGAT TGGACTGATC TGACCAAGCC CGGCGTTCGG
ATTGTGACGG CAAATCCTAA AACCTCTGGC GGGGCTCGCT GGAATTTCCT CGGGGCTTGG
GGCTCTGTCA CTCAGACCGG TGGCACAGAA GAGCAAGCCC TTCAGTTCAC GACTGATATC
TACAAGAACG TGCCAATCTT GGCCAAAGAT GCACGGGAAT CGACTGACGT TTTCACCAAG
GGGCAAGCTG ATGTTTTGCT CAACTATGAA AACGAACTCA TTCTGGCTCA ACAGAAAGGC
GAGAAAGTCG ATTACGCGAT TCCGCCAGTC AATATCAATA TTCAGGGGCC AGTAGCGGTC
GTCGATACCT ACACGGATAA GCACGGTACT CGCAAAGTGA GCGAGGCCTT TGTGCAGTTC
TTGTTCACTC CCGAAGCCCA AGCAGAGTTT GCCAAAGTCG GTTTCCGTCC AGCTCTGCCC
GAGGGAGTTG ATCCTCAGCT GCTGGCCCCA TTTCCGAAGA TTCAAACTTG GTTTACCGTC
GCAGATTTAG GTGGCTGGGC GAAGGTTCAA CCGGAGTTCT TTGGTGACGG CGGCTGGTTT
GACAAGGTCC AGCAGGCGGT CGCCGGCCGC TAG
 
Protein sequence
MKTAWTRRSF LQSAALATAT VITIAACGGN NQSSSGGSGQ PVEVTLVSYA VTQAAYEQII 
PKFAAQWKEK TGQEVRFNQS YGGSGSQTRA VIDGLEADVV ALALESDINQ IEKAGLIQPG
WQQRVPNNGI ITNSVVALVT QEGNPKGIKD WTDLTKPGVR IVTANPKTSG GARWNFLGAW
GSVTQTGGTE EQALQFTTDI YKNVPILAKD ARESTDVFTK GQADVLLNYE NELILAQQKG
EKVDYAIPPV NINIQGPVAV VDTYTDKHGT RKVSEAFVQF LFTPEAQAEF AKVGFRPALP
EGVDPQLLAP FPKIQTWFTV ADLGGWAKVQ PEFFGDGGWF DKVQQAVAGR