Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1681 |
Symbol | |
ID | 3775380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1749076 |
End bp | 1750128 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800119 |
Product | thiosulphate-binding protein |
Protein accession | YP_400698 |
Protein GI | 81300490 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0235432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.49797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG CCTGGACTCG CCGCTCCTTT CTCCAATCTG CTGCTTTGGC CACAGCCACT GTGATCACGA TCGCAGCTTG CGGCGGTAAC AATCAATCTT CTTCCGGTGG TAGCGGTCAA CCCGTTGAAG TCACGCTGGT TTCCTACGCA GTCACCCAAG CGGCCTACGA GCAGATCATT CCCAAATTTG CCGCTCAGTG GAAAGAAAAG ACCGGCCAAG AGGTGCGGTT TAACCAAAGC TATGGCGGTT CAGGCTCGCA AACCCGCGCG GTTATTGATG GCCTCGAAGC TGATGTTGTC GCGCTTGCCT TAGAATCCGA CATCAACCAA ATCGAGAAAG CTGGCCTAAT TCAGCCTGGC TGGCAACAAC GGGTTCCCAA TAACGGCATC ATCACCAATT CAGTTGTGGC TTTGGTGACC CAAGAAGGCA ATCCCAAGGG CATCAAAGAT TGGACTGATC TGACCAAGCC CGGCGTTCGG ATTGTGACGG CAAATCCTAA AACCTCTGGC GGGGCTCGCT GGAATTTCCT CGGGGCTTGG GGCTCTGTCA CTCAGACCGG TGGCACAGAA GAGCAAGCCC TTCAGTTCAC GACTGATATC TACAAGAACG TGCCAATCTT GGCCAAAGAT GCACGGGAAT CGACTGACGT TTTCACCAAG GGGCAAGCTG ATGTTTTGCT CAACTATGAA AACGAACTCA TTCTGGCTCA ACAGAAAGGC GAGAAAGTCG ATTACGCGAT TCCGCCAGTC AATATCAATA TTCAGGGGCC AGTAGCGGTC GTCGATACCT ACACGGATAA GCACGGTACT CGCAAAGTGA GCGAGGCCTT TGTGCAGTTC TTGTTCACTC CCGAAGCCCA AGCAGAGTTT GCCAAAGTCG GTTTCCGTCC AGCTCTGCCC GAGGGAGTTG ATCCTCAGCT GCTGGCCCCA TTTCCGAAGA TTCAAACTTG GTTTACCGTC GCAGATTTAG GTGGCTGGGC GAAGGTTCAA CCGGAGTTCT TTGGTGACGG CGGCTGGTTT GACAAGGTCC AGCAGGCGGT CGCCGGCCGC TAG
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Protein sequence | MKTAWTRRSF LQSAALATAT VITIAACGGN NQSSSGGSGQ PVEVTLVSYA VTQAAYEQII PKFAAQWKEK TGQEVRFNQS YGGSGSQTRA VIDGLEADVV ALALESDINQ IEKAGLIQPG WQQRVPNNGI ITNSVVALVT QEGNPKGIKD WTDLTKPGVR IVTANPKTSG GARWNFLGAW GSVTQTGGTE EQALQFTTDI YKNVPILAKD ARESTDVFTK GQADVLLNYE NELILAQQKG EKVDYAIPPV NINIQGPVAV VDTYTDKHGT RKVSEAFVQF LFTPEAQAEF AKVGFRPALP EGVDPQLLAP FPKIQTWFTV ADLGGWAKVQ PEFFGDGGWF DKVQQAVAGR
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