| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1677 |
|---|
| Symbol | |
|---|
| ID | 3775749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1745500 |
|---|
| End bp | 1746597 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800115 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400694 |
|---|
| Protein GI | 81300486 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.32351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.49797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCG AGCGGTTGAT CATCATCGGT GCTGGTGCGA TCGGGGCTTG CTTAGCCTAC
GAGCTCAGTG CCGATCCGCG CTATCAGATC ACCGTCATCG ATCAGGCGGC TGGCCCAGCA
ACCGGTGCAA CCGGTGCTGC TCTGGGGGTC CTGATCGGCG TCCTTTGTCA GCGCACCAAG
GGCCGTTTTT GGCAGTTGCG TCAGCGCACC CTAGCTCGCT ATCAAAGCTT GATTCCTGAA
CTAGAAGCGG CGATCGGTCA GCCCATTCCA GGCCATTCCG GTCTACTAAA GCTGGTCATG
GATCCGGCGG AACGACCCGG CTGGGAGCAG CTGCAAGCGA TCCGTCGCCA GCAGGGTTAC
GACTTGGAAC TGTGGGATCC CTCTGAACTG CACGATCGCA TCCCCGGTGT GGTGGCCGAT
CCATTCGCCC TCGCCGTCTG GTCGCCCTAC GATCGCCAGA TTGATCCCAC TGCGCTGACA
CAGGCGTTGG TGACTACGGC GCAGCAACGG GGGGTCGAGT TTTGCTTCAA CCAGCCGGTG
CAAAACCTGC AGCGATCGGG CGATCGTGAA ATTGTCGTCA ATGATCGCGC TTGTGATTGG
CTGATCCTCA GTGCGGGCTT GGGCTCAACA GCGATTGCAC AGCAACTCGG GCTGGAATTA
CCGATGCAAC CCGTTATGGG ACAAGCGTTG CGGATGCGCT GGCCAAATGA TCGTTGGCCT
CAACAGGTGA TCACTGCCGA AGATATTCAC CTTGTGCCCC TGGGCGATCG CGAGTTTTGG
CTCGGGGCGA CGGTGGAAAT TCCACCAGAT CAAATTGCGA TCGCGCCGCA ACCGGAATAC
CTAGAAATGC TGCGATCGCG GGCTGAACAA TTCTGGCCCG ATCTCAAGCA AGCGGAAGTG
CTGCAGGCGT GGCAAGGCTA TCGCCCACGC CCACTGGGGC GACCAGCGCC GGTGATTGAG
CGCCTGACGG ACTGGCCCAA TGTGATTGTG GCGACGGCTC ACTATCGCAA TGGGCTGTTG
CTAGCGCCGG TGACGGCTGC AATCGTCCAG GAACTGTTGG CGACTGCAGT GCCCCCGTCC
AGCCCTGCCA TGATCTAA
|
|---|
| Protein sequence | MTPERLIIIG AGAIGACLAY ELSADPRYQI TVIDQAAGPA TGATGAALGV LIGVLCQRTK
GRFWQLRQRT LARYQSLIPE LEAAIGQPIP GHSGLLKLVM DPAERPGWEQ LQAIRRQQGY
DLELWDPSEL HDRIPGVVAD PFALAVWSPY DRQIDPTALT QALVTTAQQR GVEFCFNQPV
QNLQRSGDRE IVVNDRACDW LILSAGLGST AIAQQLGLEL PMQPVMGQAL RMRWPNDRWP
QQVITAEDIH LVPLGDREFW LGATVEIPPD QIAIAPQPEY LEMLRSRAEQ FWPDLKQAEV
LQAWQGYRPR PLGRPAPVIE RLTDWPNVIV ATAHYRNGLL LAPVTAAIVQ ELLATAVPPS
SPAMI
|
|---|
| |